RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FTMTQ8N4E7 242 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 C9orf106Q8NAJ2 232 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 RPS4Y2Q8TD47 263 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 THEM6Q8WUY1 208 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 ORAI1Q96D31 301 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 TTTY10Q9BZA0 68 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 BRD7Q9NPI1 651 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 NUDT15Q9NV35 164 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 COQ3Q9NZJ6 369 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 GNG8Q9UK08 70 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 SIRT4Q9Y6E7 314 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-202ENST00000324340 A0A1B0GUH1 482 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 L7N2F9 121 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 PDCD5O14737 125 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 CFDP00746 253 aaPredicted RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 OR8G3PP0DMU2 310 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 PPP3CBP16298 524 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 RAB13P51153 203 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 MMP15P51511 669 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 HIST1H3AP68431 136 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 SIRPAP78324 504 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 ENDOGQ14249 297 aaKnown RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 HIST2H3PS2Q5TEC6 136 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 LIPNQ5VXI9 398 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 DMKNQ6E0U4 476 aaPredicted RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 FDX2Q6P4F2 183 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 RPL22L1Q6P5R6 122 aaKnown RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 SEM1Q6ZVN7 128 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 HIST2H3AQ71DI3 136 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 FAM220AQ7Z4H9 259 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 CD163Q86VB7 1156 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 PDZD9Q8IXQ8 264 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF100Q8IYN0 542 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 OR2T35Q8NGX2 323 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 RNF133Q8WVZ7 376 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 FOXB1Q99853 325 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 CACNG6Q9BXT2 260 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 SLC25A32Q9H2D1 315 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 C1orf198Q9H425 327 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 ASF1BQ9NVP2 202 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 MBD2Q9UBB5 411 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 ST6GALNAC2Q9UJ37 374 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 GDF2Q9UK05 429 aaPredicted RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 FBXL3Q9UKT7 428 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 MGAQ8IWI9 3026 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 MAP1BP46821 2468 aaKnown RBP11.18□□□□□ -0.62
DDX39A-202ENST00000324340 CACNA1GO43497 2377 aa11.18□□□□□ -0.62
DDX39A-202ENST00000324340 PCP4L1A6NKN8 68 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF587BE7ETH6 402 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 G3V3Q6 166 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 KRT33AO76009 404 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 OR2A4O95047 310 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 UBL3O95164 117 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CNOT4O95628 575 aaKnown RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 WNT11O96014 354 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 IL5P05113 134 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CRHP06850 196 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CST2P09228 141 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 EDN3P14138 238 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ABOP16442 354 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ELK1P19419 428 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CELP19835 753 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 DCTDP32321 178 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 TIMP3P35625 211 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 KIR2DL2P43627 348 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CDK5R1Q15078 307 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 SGCAQ16586 387 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 MICBQ29980 383 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 EIF2S3LQ2VIR3 472 aaKnown RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 SLC36A2Q495M3 483 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 PRR30Q53SZ7 412 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 C1orf185Q5T7R7 199 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 FBXW9Q5XUX1 488 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 UQCC3Q6UW78 93 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 NLRC3Q7RTR2 1065 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ABHD12BQ7Z5M8 362 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 TMEM17Q86X19 198 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 CCDC36Q8IYA8 594 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ZFP41Q8N8Y5 198 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 OR10S1Q8NGN2 331 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 OR6K3Q8NGY3 331 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 OR2AJ1Q8NGZ0 328 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ZFP3Q96NJ6 502 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 OR2A7Q96R45 310 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 C12orf57Q99622 126 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ELOVL3Q9HB03 270 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-202ENST00000324340 ASH2LQ9UBL3 628 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 UPB1Q9UBR1 384 aa11.17□□□□□ -0.62
DDX39A-202ENST00000324340 EMC9Q9Y3B6 208 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms