RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 OR10A2Q9H208 303 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 EXO5Q9H790 373 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 IL17BQ9UHF5 180 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 KLK13Q9UKR3 277 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 ELF5Q9UKW6 265 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 C5orf63A6NC05 138 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 CD74P04233 296 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 AMY2AP04746 511 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 MELTFP08582 738 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 VSIG10L2P0DP72 767 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 DNASE1P24855 282 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 OR3A4PP47883 348 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 TRIP6Q15654 476 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 LINC00696Q6ZRV3 163 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 NLRC3Q7RTR2 1065 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 TRAPPC6BQ86SZ2 158 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 FJX1Q86VR8 437 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 SULF2Q8IWU5 870 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 GALNT16Q8N428 558 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 OR2T35Q8NGX2 323 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 PP6455Q8WZ26 134 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 C10orf35Q96D05 121 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 CMBLQ96DG6 245 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF845Q96IR2 970 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 ALKBH3Q96Q83 286 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 GPR179Q6PRD1 2367 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 DMDP11532 3685 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 IGKV1-9A0A0C4DH69 117 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 M0QYG6 137 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 SYNGR3O43761 229 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 ALX3O95076 343 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 DBHP09172 617 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 B4GALT1P15291 398 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 CRYGSP22914 178 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 S100A1P23297 94 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 RFC3P40938 356 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 MEF2DQ14814 521 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 IDO2Q6ZQW0 420 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 Q6ZSR3 168 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 RNF144BQ7Z419 303 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 OR1F12Q8NHA8 337 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 ABHD3Q8WU67 409 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM45BQ96B21 275 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 FOXB1Q99853 325 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM59Q9BXS4 323 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 TINAGL1Q9GZM7 467 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 GPR35Q9HC97 309 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 IFT46Q9NQC8 304 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 PLA2G3Q9NZ20 509 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 PIGLQ9Y2B2 252 aa11.34□□□□□ -0.59
SPTLC1-201ENST00000262554 WIPF3A6NGB9 483 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 CDC14BO60729 498 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 MPIG6BO95866 241 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 ITGB2P05107 769 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 PRF1P14222 555 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 GNB3P16520 340 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 FAHP16930 419 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 LHX2P50458 406 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 PCBD1P61457 104 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 PLGLB1Q02325 96 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 KISS1Q15726 138 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 CEACAM16Q2WEN9 425 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 ZNF774Q6NX45 483 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 CNTRLQ7Z7A1 2325 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 BPIFB2Q8N4F0 458 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 OR52B4Q8NGK2 314 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 HES7Q9BYE0 225 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 SELENOIQ9C0D9 397 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 CHST5Q9GZS9 411 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 LPAR5Q9H1C0 372 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.6
SPTLC1-201ENST00000262554 FAM166BA8MTA8 275 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 CRTAPO75718 401 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 GIPP09681 153 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 SRYQ05066 204 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 CSRP2Q16527 193 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 RNASE10Q5GAN6 216 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 TMEM104Q8NE00 496 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 NUDCD2Q8WVJ2 157 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 GPR137Q96N19 417 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 NICN1Q9BSH3 213 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 URM1Q9BTM9 101 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 CST11Q9H112 138 aa11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 ALX4Q9H161 411 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 KLF13Q9Y2Y9 288 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-201ENST00000262554 NOSIPQ9Y314 301 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms