RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 OR5M11Q96RB7 305 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 SLC30A2Q9BRI3 323 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 CCDC90BQ9GZT6 254 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 ACOT13Q9NPJ3 140 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 MRPL15Q9P015 296 aaKnown RBP12.05□□□□□ -0.48
VPS25-201ENST00000253794 TAAR3PQ9P1P4 343 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 LAMP3Q9UQV4 416 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 N6AMT1Q9Y5N5 214 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 SIRT4Q9Y6E7 314 aaPredicted RBP12.05□□□□□ -0.48
VPS25-201ENST00000253794 V9GYS6 101 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 POLQO75417 2590 aa12.05□□□□□ -0.48
VPS25-201ENST00000253794 CSMD2Q7Z408 3487 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 LOC107986453A0A1B0GWG9 222 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 TIMM8AO60220 97 aaPredicted RBP12.04□□□□□ -0.48
VPS25-201ENST00000253794 ZFPL1O95159 310 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 ZNF12P17014 697 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 ACKR3P25106 362 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 ZNF367Q7RTV3 350 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 OR56B2PQ8NGI1 322 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 OR14K1Q8NGZ2 314 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 FCGR1BQ92637 280 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 C10orf35Q96D05 121 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 MBD6Q96DN6 1003 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 PGLYRP3Q96LB9 341 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 DIRC2Q96SL1 478 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 CCL19Q99731 98 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 SLC22A4Q9H015 551 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 MS4A5Q9H3V2 200 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 LIME1Q9H400 295 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 ZNF701Q9NV72 531 aaPredicted RBP12.04□□□□□ -0.48
VPS25-201ENST00000253794 NKIRAS2Q9NYR9 191 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 PMF1-BGLAPU3KQ54 211 aa12.04□□□□□ -0.48
VPS25-201ENST00000253794 PDZD2O15018 2839 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 TRBV2A0A0J9YWF9 115 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 A0A1W2PPW3 197 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 GGT3PA6NGU5 568 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 P2RY10O00398 339 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 CST4P01036 141 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 ALDH3B1P43353 468 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 MAP2K4P45985 399 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 MAP2K3P46734 347 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 CDH15P55291 814 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 MLLT11Q13015 90 aaPredicted RBP12.03□□□□□ -0.48
VPS25-201ENST00000253794 TPBGQ13641 420 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 MED22Q15528 200 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 NKPD1Q17RQ9 610 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 TMEM42Q69YG0 159 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 Q6ZR03 302 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 FTMTQ8N4E7 242 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 OR5AK2Q8NH90 309 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 RGP1Q92546 391 aaPredicted RBP12.03□□□□□ -0.48
VPS25-201ENST00000253794 SOX7Q9BT81 388 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 COMMD4Q9H0A8 199 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 ZDHHC8Q9ULC8 765 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 HHLA2Q9UM44 414 aa12.03□□□□□ -0.48
VPS25-201ENST00000253794 NOP16Q9Y3C1 178 aaKnown RBP12.03□□□□□ -0.48
VPS25-201ENST00000253794 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.48
VPS25-201ENST00000253794 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.48
VPS25-201ENST00000253794 A0A087WXM4 84 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 A0A1B0GVI7 797 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 PLSCR5A0PG75 271 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 ZSCAN5BA6NJL1 495 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 C17orf100A8MU93 164 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 SYT7O43581 403 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 LILRA1O75019 489 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 CD55P08174 381 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 RIPPLY1Q0D2K3 151 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 PCGF3Q3KNV8 242 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 FAM209AQ5JX71 171 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 ZNF676Q8N7Q3 588 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 SEMA6DQ8NFY4 1073 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 TSPAN14Q8NG11 270 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 OR13G1Q8NGZ3 307 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 NRGNQ92686 78 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 FAM71F1Q96KD3 344 aaPredicted RBP12.02□□□□□ -0.49
VPS25-201ENST00000253794 OPALINQ96PE5 141 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 MGLLQ99685 303 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 PDCD1LG2Q9BQ51 273 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 CACNG6Q9BXT2 260 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 BEX4Q9NWD9 120 aaPredicted RBP12.02□□□□□ -0.49
VPS25-201ENST00000253794 ZNF281Q9Y2X9 895 aa12.02□□□□□ -0.49
VPS25-201ENST00000253794 ANKRD17O75179 2603 aaKnown RBP12.02□□□□□ -0.49
VPS25-201ENST00000253794 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
VPS25-201ENST00000253794 DSCAMO60469 2012 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 ZNF816-ZNF321PA0A0X1KG74 233 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 GMDSO60547 372 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 PTBP3O95758 552 aaKnown RBP12.01□□□□□ -0.49
VPS25-201ENST00000253794 CPEP16870 476 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 CELP19835 753 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 ZNF81P51508 661 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 PRSS12P56730 875 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS25-201ENST00000253794 YIF1BQ5BJH7 314 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 COMMD2Q86X83 199 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms