RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 GLIPR1L1Q6UWM5 242 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 UTS2BQ765I0 119 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 OR56B4Q8NH76 319 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 OR2AE1Q8NHA4 323 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 DEDD2Q8WXF8 326 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 PP6455Q8WZ26 134 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 AKAP1Q92667 903 aaKnown RBP eCLIP15.04■□□□□ -0
RABGGTA-201ENST00000216840 FAM46BQ96A09 425 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 C10orf35Q96D05 121 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 SEH1LQ96EE3 360 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 RNF170Q96K19 258 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 DMRTB1Q96MA1 342 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 CHST5Q9GZS9 411 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 C20orf85Q9H1P6 137 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 GHITMQ9H3K2 345 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 MCUBQ9NWR8 336 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 TAS2R8Q9NYW2 309 aa15.04■□□□□ -0
RABGGTA-201ENST00000216840 WIPF3A6NGB9 483 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 RAB27BO00194 218 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 TGM6O95932 706 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 LCATP04180 440 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
RABGGTA-201ENST00000216840 CD83Q01151 205 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 SSBP1Q04837 148 aaKnown RBP15.03■□□□□ -0
RABGGTA-201ENST00000216840 UBE2V2Q15819 145 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 PABPC1L2AQ5JQF8 200 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 RAB12Q6IQ22 244 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 CRIP3Q6Q6R5 217 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 REEP6Q96HR9 211 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 FYTTD1Q96QD9 318 aaKnown RBP15.03■□□□□ -0
RABGGTA-201ENST00000216840 ACTR6Q9GZN1 396 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 SCPEP1Q9HB40 452 aa15.03■□□□□ -0
RABGGTA-201ENST00000216840 TNRC6AQ8NDV7 1962 aaKnown RBP15.03■□□□□ -0
RABGGTA-201ENST00000216840 ALX3O95076 343 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 LPLP06858 475 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 KCNJ8Q15842 424 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 GSG1Q2KHT4 349 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 DMRTC1Q5HYR2 192 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 OR2W3Q7Z3T1 314 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 ZNF101Q8IZC7 436 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 ZBTB8BQ8NAP8 495 aaPredicted RBP15.02■□□□□ -0
RABGGTA-201ENST00000216840 ZMAT3Q9HA38 289 aaKnown RBP15.02■□□□□ -0
RABGGTA-201ENST00000216840 NEK6Q9HC98 313 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 UPB1Q9UBR1 384 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 ELF5Q9UKW6 265 aaPredicted RBP15.02■□□□□ -0
RABGGTA-201ENST00000216840 CELSR3Q9NYQ7 3312 aa15.02■□□□□ -0
RABGGTA-201ENST00000216840 CEACAM4O75871 244 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 ZNF24P17028 368 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 ZNF100Q8IYN0 542 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 CPEB3Q8NE35 698 aaKnown RBP15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 OR4C16Q8NGL9 310 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 AQP3Q92482 292 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 GPER1Q99527 375 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 NKIRAS2Q9NYR9 191 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 FLVCR2Q9UPI3 526 aa15.02□□□□□ -0.01
RABGGTA-201ENST00000216840 A0A096LPE4 126 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 TRAV17A0A0B4J275 112 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 A0A1W2PPZ6 126 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 SLC22A20A6NK97 555 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 DHRS7CA6NNS2 312 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 IGHG3P01860 377 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ACKR3P25106 362 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 KISS1Q15726 138 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 LINC00303Q3SY05 128 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ZNF260Q3ZCT1 412 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ZFP69Q49AA0 526 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ASCL5Q7RTU5 278 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 SEMA6DQ8NFY4 1073 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 NPRL2Q8WTW4 380 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 CMBLQ96DG6 245 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 TP63Q9H3D4 680 aaPredicted RBP15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 B3GNT2Q9NY97 397 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 KCNMB2Q9Y691 235 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 GVINP1Q7Z2Y8 2422 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 TMEM235A6NFC5 223 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 GTF2F2P13984 249 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 FAUP35544 74 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ACTBP60709 375 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ACTG1P63261 375 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 FAPQ12884 760 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 CBX3Q13185 183 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 MED12LQ86YW9 2145 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 TMEM104Q8NE00 496 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 GIMAP1Q8WWP7 306 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 OR10A4Q9H209 315 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 OR51J1Q9H342 316 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ATPIF1Q9UII2 106 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 ZNF175Q9Y473 711 aa15.01□□□□□ -0.01
RABGGTA-201ENST00000216840 PEX14O75381 377 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 FCER2P06734 321 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 AKAIN1P0CW23 69 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 AGTR1P30556 359 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 VEGFCP49767 419 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 TNK1Q13470 666 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 Q6ZTK2 550 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 TCTE3Q8IZS6 198 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 OR4D10Q8NGI6 311 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 KCNG3Q8TAE7 436 aa15□□□□□ -0.01
RABGGTA-201ENST00000216840 NUDT16L1Q9BRJ7 211 aaKnown RBP15□□□□□ -0.01
RABGGTA-201ENST00000216840 LPAR5Q9H1C0 372 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms