RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ADAT1Q9BUB4 502 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 DPAGT1Q9H3H5 408 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 MAGEL2Q9UJ55 1249 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 CAB39Q9Y376 341 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 APOC1P02654 83 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 BLVRAP53004 296 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 SPIBQ01892 262 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 SNCBQ16143 134 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 PRAMEF6Q5VXH4 476 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 OR52L1Q8NGH7 329 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 MAP6Q96JE9 813 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 CHIAQ9BZP6 476 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 MMP27Q9H306 513 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 CNTD2Q9H8S5 307 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 RNPEPL1Q9HAU8 725 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 MRPL22Q9NWU5 206 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 ADA2Q9NZK5 511 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 KPTNQ9Y664 436 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 WNK1Q9H4A3 2382 aa14.77□□□□□ -0.05
SHKBP1-227ENST00000602011 IGHV1-69DA0A0B4J2H0 117 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 BHLHE40O14503 412 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 XRCC2O43543 280 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 DIRAS1O95057 198 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 LHBP01229 141 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 IGHV1-69P01742 117 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 MUC1P15941 1255 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 SLC15A1P46059 708 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 HMGA2P52926 109 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 ZNF92Q03936 586 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 SPATS1Q496A3 300 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 TEX30Q5JUR7 227 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 TEX36Q5VZQ5 186 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 SFRP4Q6FHJ7 346 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 BRICD5Q6PL45 260 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 GDPGP1Q6ZNW5 385 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 CCT8L2Q96SF2 557 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 TBX15Q96SF7 602 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 KCNJ15Q99712 375 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 MARCH7Q9H992 704 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 IL1RAPQ9NPH3 570 aa14.76□□□□□ -0.05
SHKBP1-227ENST00000602011 ANKRD30BLA7E2S9 258 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 C3orf80F5H4A9 247 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 TIPRLO75663 272 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 CLPXO76031 633 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 SEMG1P04279 462 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 FABP3P05413 133 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 HSD17B1P14061 328 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 CFL1P23528 166 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 FMO3P31513 532 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 TAF13Q15543 124 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 PCK2Q16822 640 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 MICBQ29980 383 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 LDLRAD3Q86YD5 345 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 SDR9C7Q8NEX9 313 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 PROKR2Q8NFJ6 384 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 SPSB4Q96A44 273 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 DDOQ99489 341 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 SIRPDQ9H106 197 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 TNFRSF19Q9NS68 423 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 C1orf123Q9NWV4 160 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 IL20Q9NYY1 176 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 CTSZQ9UBR2 303 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 RNF114Q9Y508 228 aa14.75□□□□□ -0.05
SHKBP1-227ENST00000602011 A0A1B0GVI7 797 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 SFTPBP07988 381 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 NAA10P41227 235 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 IER3P46695 156 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 CDONQ4KMG0 1287 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 METAP1DQ6UB28 335 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 BTN2A1Q7KYR7 527 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 RHOUQ7L0Q8 258 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 SLC36A1Q7Z2H8 476 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 CMTM4Q8IZR5 234 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 FAM86B1Q8N7N1 296 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 BOLLQ8N9W6 283 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 C12orf43Q96C57 262 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 NSMCE2Q96MF7 247 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 COPS4Q9BT78 406 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 TOR3AQ9H497 397 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 PDP1Q9P0J1 537 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 BAIAP2Q9UQB8 552 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 FAM96BQ9Y3D0 163 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 CDH10Q9Y6N8 788 aa14.74□□□□□ -0.05
SHKBP1-227ENST00000602011 A0A0G2JK05 382 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 A6NLC8 198 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 DVL1O14640 695 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 GRPP07492 148 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 RRM2P31350 389 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 ARF6P62330 175 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 GRB2P62993 217 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 RELBQ01201 579 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 GUCA2AQ02747 115 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 SNAI3Q3KNW1 292 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 SAMD4BQ5PRF9 694 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 GLYATL3Q5SZD4 288 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 SLC35F1Q5T1Q4 408 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 DCXRQ7Z4W1 244 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 ZDHHC21Q8IVQ6 265 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 FTMTQ8N4E7 242 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms