RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CLEC4FQ8N1N0 589 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TCEANCQ8N8B7 351 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CNEP1R1Q8N9A8 125 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 STEAP2Q8NFT2 490 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR4D10Q8NGI6 311 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR4C15Q8NGM1 316 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 OCC1Q8TAD7 63 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 GTF2H4Q92759 462 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 RAB8BQ92930 207 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CHMP6Q96FZ7 201 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 SH3YL1Q96HL8 342 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ITCHQ96J02 903 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ATP6V1G3Q96LB4 118 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PPP1R36Q96LQ0 422 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PANX1Q96RD7 426 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZBTB18Q99592 522 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PAIP2Q9BPZ3 127 aaKnown RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PYGO2Q9BRQ0 406 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 INPP5KQ9BT40 448 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 MED18Q9BUE0 208 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CCDC28BQ9BUN5 200 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 THUMPD3Q9BV44 507 aaKnown RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 SRXN1Q9BYN0 137 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 OPN3Q9H1Y3 402 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CENPHQ9H3R5 247 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 LIME1Q9H400 295 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 WDR55Q9H6Y2 383 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 RMND5AQ9H871 391 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 VIPAS39Q9H9C1 493 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TPT1P8Q9HAU6 139 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 BCL2L10Q9HD36 194 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CALML5Q9NZT1 146 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CHRNA9Q9UGM1 479 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 MOB4Q9Y3A3 225 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 HDGFL3Q9Y3E1 203 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 WIPI2Q9Y4P8 454 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 USH1CQ9Y6N9 552 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CSPG4Q6UVK1 2322 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 A0A096LPI6 279 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GOLGA8QA0A0J9YX86 632 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GOLGA8OA6NCC3 632 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF716A6NP11 495 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 F8VVB4 439 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 F8VWA3 439 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GOLGA8NF8WBI6 632 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SULT2B1O00204 365 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC1A7O00341 560 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GPR171O14626 319 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 POLR3GO15318 223 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GMFGO60234 142 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 EIF1BO60739 113 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SAP30O75446 220 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 C1QCP02747 245 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 UBTFL6P0CB48 400 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ETS2P15036 469 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 H2AFXP16104 143 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GPX2P18283 190 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 KLK2P20151 261 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 COX5AP20674 150 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 PPIBP23284 216 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 PAX7P23759 505 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CHI3L1P36222 383 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ACAA2P42765 397 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC1A3P43003 542 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ATP4BP51164 291 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CCR4P51679 360 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 POLR2HP52434 150 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 POLR2JP52435 117 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CRISP3P54108 245 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 CASP9P55211 416 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 DSTNP60981 165 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 HPCAP84074 193 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 MERTKQ12866 999 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 RGNQ15493 299 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAM189A2Q15884 450 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SYPL1Q16563 259 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ACKR1Q16570 336 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 NDUFAF6Q330K2 333 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 KRTAP21-3Q3LHN1 58 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 LIN52Q52LA3 116 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 GPAT3Q53EU6 434 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 FGD3Q5JSP0 725 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 MRPL2Q5T653 305 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 SHEQ5VZ18 495 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 TNFAIP8L2Q6P589 184 aaPredicted RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 PAQR6Q6TCH4 344 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 TFAP2EQ6VUC0 442 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF550Q7Z398 422 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 NUFIP2Q7Z417 695 aaKnown RBP2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 PIGWQ7Z7B1 504 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 P2RY8Q86VZ1 359 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 FUNDC1Q8IVP5 155 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 TUSC5Q8IXB3 177 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ARFGAP2Q8N6H7 521 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ANKFN1Q8N957 763 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 AQP11Q8NBQ7 271 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF563Q8TA94 476 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 PIGXQ8TBF5 258 aa2.93□□□□□ -1.94
CKS1BP3-201ENST00000600888 MGARPQ8TDB4 240 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms