RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 M0R135 149 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 SELEP16581 610 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 KITLGP21583 273 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 RAD23AP54725 363 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 RSPO1Q2MKA7 263 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 SHISA2Q6UWI4 295 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 DRAM2Q6UX65 266 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 FBXW12Q6X9E4 464 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 COLCA1Q6ZS62 124 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 TIGD4Q8IY51 512 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF283Q8N7M2 679 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF799Q96GE5 643 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 KCNJ15Q99712 375 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 RIBC2Q9H4K1 309 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF696Q9H7X3 374 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 ZMAT3Q9HA38 289 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 MMP26Q9NRE1 261 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 DCAF16Q9NXF7 216 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 PTTG3PQ9NZH4 202 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 NUP50Q9UKX7 468 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 PPIAL4AQ9Y536 164 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 PCDHGB1Q9Y5G3 927 aa14.76□□□□□ -0.05
SHKBP1-203ENST00000594298 A8MXK9 166 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TMPRSS2O15393 492 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 SBK2P0C263 348 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF12P17014 697 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TNFRSF1AP19438 455 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TNFSF4P23510 183 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 PRTN3P24158 256 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 SLC6A9P48067 706 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF154Q13106 437 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 APOFQ13790 326 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 ARMCX4Q5H9R4 360 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 C12orf73Q69YU5 71 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 LRRC28Q86X40 367 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 KLHL36Q8N4N3 616 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 SIGLECL1Q8N7X8 197 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TCEANCQ8N8B7 351 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 OR10S1Q8NGN2 331 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TMEM163Q8TC26 289 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TEAD3Q99594 435 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 C9orf16Q9BUW7 83 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 ABHD6Q9BV23 337 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 GABARAPL3Q9BY60 117 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 PATZ1Q9HBE1 687 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 USE1Q9NZ43 259 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 AUP1Q9Y679 476 aa14.75□□□□□ -0.05
SHKBP1-203ENST00000594298 TRAPPC2LH3BP13 241 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 PRKYO43930 277 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 LYNP07948 512 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 SLC2A5P22732 501 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 HSD11B1P28845 292 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 OTX1P32242 354 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 ALDH3A2P51648 485 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 GABPB1Q06547 395 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 KLF17Q5JT82 389 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 NXNL2Q5VZ03 156 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 SLC16A9Q7RTY1 509 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 PQLC1Q8N2U9 271 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 BBS1Q8NFJ9 593 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 OTOSQ8NHW6 89 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 THEM6Q8WUY1 208 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 RNF133Q8WVZ7 376 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF582Q96NG8 517 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 YIPF3Q9GZM5 350 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 POFUT1Q9H488 388 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF69Q9UC07 566 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 INSIG2Q9Y5U4 225 aa14.74□□□□□ -0.05
SHKBP1-203ENST00000594298 SLC22A31A6NKX4 558 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 F5H0A9 414 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 EI24O14681 340 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 KCNAB3O43448 404 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 SELENOFO60613 162 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 BAG2O95816 211 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 ALPLP05186 524 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 H2BFMP0C1H6 154 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 EPHA2P29317 976 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 PRKXP51817 358 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 CDC42P60953 191 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 BTG1P62324 171 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 EFNB1P98172 346 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 HNRNPA0Q13151 305 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 Q6ZR03 302 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 MEPCEQ7L2J0 689 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 GID4Q8IVV7 300 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 SIGLEC11Q96RL6 698 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 MRI1Q9BV20 369 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 IL19Q9UHD0 177 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 LAMP5Q9UJQ1 280 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 TMEM14AQ9Y6G1 99 aa14.73□□□□□ -0.05
SHKBP1-203ENST00000594298 DNAJC9-AS1A6NH13 148 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 PSKH1P11801 424 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 CPT2P23786 658 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 NAA10P41227 235 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 SEC61A1P61619 476 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 HLXQ14774 488 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 ZSCAN26Q16670 478 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 OR2T2Q6IF00 324 aa14.72□□□□□ -0.05
SHKBP1-203ENST00000594298 KCTD18Q6PI47 426 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms