RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 FAAHO00519 579 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 LDB2O43679 373 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OR1I1O60431 355 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 PRAMEF11O60813 436 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 WISP3O95389 354 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SNAI1O95863 264 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SCGB1D1O95968 90 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 GBAP04062 536 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OR5G3P0C626 314 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 LIPCP11150 499 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 CCL2P13500 99 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 HOXB2P14652 356 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 CD19P15391 556 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 CSNK2A2P19784 350 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 GRK6P43250 576 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OR3A2P47893 321 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 NPY4RP50391 375 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 ZNF41P51814 821 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 MVDP53602 400 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 FOXA1P55317 472 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 HIST1H3AP68431 136 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SPIBQ01892 262 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OC90Q02509 493 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 CRMP1Q14194 572 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 ELOBQ15370 118 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 NSDHLQ15738 373 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 TMEM183BQ1AE95 376 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 TCTN1Q2MV58 587 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 ZNF750Q32MQ0 723 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 LINC00303Q3SY05 128 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 HIKESHIQ53FT3 197 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 IFI44LQ53G44 452 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 PDZD11Q5EBL8 140 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 PRAMEF5Q5TYX0 476 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 GFI1BQ5VTD9 330 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 DCAF12L2Q5VW00 463 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 PRAMEF6Q5VXH4 476 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 TMEM225Q6GV28 225 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 RGMBQ6NW40 437 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 MRPL21Q7Z2W9 205 aaKnown RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 S100A7AQ86SG5 101 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 PRIMA1Q86XR5 153 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 FRMD1Q8N878 549 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 MRPL43Q8N983 215 aaKnown RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 LFNGQ8NES3 379 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OR4D6Q8NGJ1 314 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OR13C4Q8NGS5 318 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 OR6N1Q8NGY5 312 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SFXN5Q8TD22 340 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 BCL2L2Q92843 193 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 THOC3Q96J01 351 aaKnown RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 JSRP1Q96MG2 331 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 CCDC3Q9BQI4 270 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SLC17A9Q9BYT1 436 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 PKIBQ9C010 78 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 ZBP1Q9H171 429 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SLC35B3Q9H1N7 401 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 MRPL17Q9NRX2 175 aaKnown RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 SEMA4GQ9NTN9 838 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 TMEM242Q9NWH2 141 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 GPATCH2LQ9NWQ4 482 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 ELOVL5Q9NYP7 299 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 CNIH4Q9P003 139 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 MRPL27Q9P0M9 148 aaKnown RBP5.42□□□□□ -1.54
SMAD4-203ENST00000585448 LRIT1Q9P2V4 623 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 VPS29Q9UBQ0 182 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 ZNF337Q9Y3M9 751 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 KIAA1217Q5T5P2 1943 aa5.42□□□□□ -1.54
SMAD4-203ENST00000585448 NRXN3Q9Y4C0 1643 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SIGLEC1Q9BZZ2 1709 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TRBV6-7A0A0A0MS04 114 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TRAV1-2A0A0B4J238 106 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 IGHV2OR16-5A0A0B4J2B6 119 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SUPT3HB4E1H0 165 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PYCARD-AS1I3L0S3 204 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SMIM22K7EJ46 135 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 K7EPK0 472 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CORTO00230 105 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 DCTN6O00399 190 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 DIRAS1O95057 198 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TRGC2P03986 189 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 OR4A8P0C604 315 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CT45A8P0DMV1 189 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CT45A9P0DMV2 189 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 GPX2P18283 190 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 WT1P19544 449 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 HNRNPA2B1P22626 353 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TNFSF4P23510 183 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 NMBRP28336 390 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 S100A3P33764 101 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 LGALS7P47929 136 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PDX1P52945 283 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ELLP55199 621 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SUMO3P55854 103 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 BIDP55957 195 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 LILRA4P59901 499 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CYCSP99999 105 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CDK3Q00526 305 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PAX2Q02962 417 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms