RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SLC22A4Q9H015 551 aa14.37□□□□□ -0.11
GPHN-211ENST00000556020 MMADHCQ9H3L0 296 aaPredicted RBP14.37□□□□□ -0.11
GPHN-211ENST00000556020 FN3KRPQ9HA64 309 aa14.37□□□□□ -0.11
GPHN-211ENST00000556020 NBEAL1Q6ZS30 2694 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 GRPP07492 148 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 HSD11B1P28845 292 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 GRK5P34947 590 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 BLVRAP53004 296 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 SFRP4Q6FHJ7 346 aaPredicted RBP14.36□□□□□ -0.11
GPHN-211ENST00000556020 DPY19L4Q7Z388 723 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 TMEM179BQ7Z7N9 219 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 Q8TCH9 128 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 ERGIC1Q969X5 290 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 INTS14Q96SY0 518 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 OR51V1Q9H2C8 321 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 CMC2Q9NRP2 79 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 DNAJC27Q9NZQ0 273 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 PDP1Q9P0J1 537 aaPredicted RBP14.36□□□□□ -0.11
GPHN-211ENST00000556020 RNF7Q9UBF6 113 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 CLN8Q9UBY8 286 aa14.36□□□□□ -0.11
GPHN-211ENST00000556020 NOP16Q9Y3C1 178 aaKnown RBP14.36□□□□□ -0.11
GPHN-211ENST00000556020 IGHV2-70DA0A0C4DH43 119 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 A6NLC8 198 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 C3orf80F5H4A9 247 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 ACOT8O14734 319 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 GMDSO60547 372 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 E2F6O75461 281 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 IGHV4-38-2P0DP08 117 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 GSTT1P30711 240 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 SLC15A1P46059 708 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 UBA52P62987 128 aaKnown RBP14.35□□□□□ -0.11
GPHN-211ENST00000556020 GRB2P62993 217 aaKnown RBP14.35□□□□□ -0.11
GPHN-211ENST00000556020 PAX8Q06710 450 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 OR8B8Q15620 311 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 PCK2Q16822 640 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 TIGD6Q17RP2 521 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 GFOD2Q3B7J2 385 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 TEX30Q5JUR7 227 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 LINC01590Q5TEZ4 76 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 LRRN1Q6UXK5 716 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 DCDC5Q6ZRR9 648 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 C3orf56Q8N813 242 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 CANT1Q8WVQ1 401 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 RAB40AQ8WXH6 277 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 MS4A7Q9GZW8 240 aaPredicted RBP14.35□□□□□ -0.11
GPHN-211ENST00000556020 BRD7Q9NPI1 651 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 C1orf123Q9NWV4 160 aa14.35□□□□□ -0.11
GPHN-211ENST00000556020 MRPL15Q9P015 296 aaKnown RBP14.35□□□□□ -0.11
GPHN-211ENST00000556020 hCG_1807616A0A1W2PRN6 198 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 TMEM89A2RUT3 159 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 XRCC2O43543 280 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 PAICSP22234 425 aaKnown RBP14.34□□□□□ -0.11
GPHN-211ENST00000556020 PAX2Q02962 417 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 GINS1Q14691 196 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 CD300LDQ6UXZ3 194 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 ZNF826PQ6ZT77 177 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 FAM57BQ71RH2 274 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 SPATA24Q86W54 205 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 HS3ST5Q8IZT8 346 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 ZMYND19Q96E35 227 aaPredicted RBP14.34□□□□□ -0.11
GPHN-211ENST00000556020 TECTBQ96PL2 329 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 AMELYQ99218 206 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 NUDT16L1Q9BRJ7 211 aaKnown RBP14.34□□□□□ -0.11
GPHN-211ENST00000556020 ABHD6Q9BV23 337 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 C1orf21Q9H246 121 aa14.34□□□□□ -0.11
GPHN-211ENST00000556020 SOX21Q9Y651 276 aaPredicted RBP14.34□□□□□ -0.11
GPHN-211ENST00000556020 TRAV40A0A0B4J280 105 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.33□□□□□ -0.12
GPHN-211ENST00000556020 DNAJC9-AS1A6NH13 148 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 AQP12BA6NM10 295 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 ANKRD30BLA7E2S9 258 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 GLCEO94923 617 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 CPT2P23786 658 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 BAMBIQ13145 260 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 GK3PQ14409 553 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 KLHL12Q53G59 568 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 WDR25Q64LD2 544 aaPredicted RBP14.33□□□□□ -0.12
GPHN-211ENST00000556020 PLBD1Q6P4A8 553 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 DOK3Q7L591 496 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 SLC16A9Q7RTY1 509 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 AQP12AQ8IXF9 295 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 OR8S1Q8NH09 359 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 REEP6Q96HR9 211 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 ZNF48Q96MX3 618 aaPredicted RBP14.33□□□□□ -0.12
GPHN-211ENST00000556020 OPA3Q9H6K4 179 aa14.33□□□□□ -0.12
GPHN-211ENST00000556020 ARRDC5A6NEK1 342 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 PRR23D1E9PI22 279 aaPredicted RBP14.32□□□□□ -0.12
GPHN-211ENST00000556020 LGALS8O00214 317 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 GYG2O15488 501 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 SELENOFO60613 162 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 FSTL3O95633 263 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 H2BFMP0C1H6 154 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 PRR23D2P0DMB1 279 aaPredicted RBP14.32□□□□□ -0.12
GPHN-211ENST00000556020 PRKACGP22612 351 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 ZNF121P58317 390 aaPredicted RBP14.32□□□□□ -0.12
GPHN-211ENST00000556020 FLOT2Q14254 428 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 TRPM8Q7Z2W7 1104 aa14.32□□□□□ -0.12
GPHN-211ENST00000556020 SPERTQ8NA61 448 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms