RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 M6PRP20645 277 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 BLVRBP30043 206 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 RAB12Q6IQ22 244 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 OR13C8Q8NGS7 320 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 MFSD8Q8NHS3 518 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 PAQR8Q8TEZ7 354 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 CCNL2Q96S94 520 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 PRR14LQ5THK1 2151 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 LINC00862A6NCI5 91 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 H3BMH7 237 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 CD1AP06126 327 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 KLK3P07288 261 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 OPRM1P35372 400 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 FXYD4P59646 89 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 ROM1Q03395 351 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 SPICQ8N5J4 248 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 WDR13Q9H1Z4 485 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 TNFSF11O14788 317 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 IL5P05113 134 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 GABRA1P14867 456 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 SERPINF1P36955 418 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 CADM4Q8NFZ8 388 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 DYRK2Q92630 601 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
PRPF40B-209ENST00000548825 A0A1W2PQD3 144 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 MPTX1A8MV57 137 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 CCL3P10147 92 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 CPN1P15169 458 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 SLC22A8Q8TCC7 542 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 ST8SIA1Q92185 356 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 GPR173Q9NS66 373 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 EHFQ9NZC4 300 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 SPRY1O43609 319 aaPredicted RBP12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 PMS2P2O95744 297 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 CSNK1A1P48729 337 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 BHLHE23Q8NDY6 225 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 PHB2Q99623 299 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 ALKBH4Q9NXW9 302 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 RAB22AQ9UL26 194 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 B3GALT5Q9Y2C3 310 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 R4GN57 208 aa12.1□□□□□ -0.47
PRPF40B-209ENST00000548825 CCDC163A0A0D9SF12 145 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 IGHV3-64DA0A0J9YX35 117 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 HSPB6O14558 160 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 MFSD13AQ14CX5 517 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 CLPPQ16740 277 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 PLPPR5Q32ZL2 321 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 ZNF660Q6AZW8 331 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 TMEM88Q6PEY1 159 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 RNF133Q8WVZ7 376 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 HLA-CQ95604 372 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 DHRS9Q9BPW9 319 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 B3GAT1Q9P2W7 334 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 E9PLN8 166 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 TLX3O43711 291 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 NAGAP17050 411 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 GALNSP34059 522 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 SPACA9Q96E40 222 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 FAM206AQ9NX38 181 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 BDP1A6H8Y1 2624 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 WIPF3A6NGB9 483 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 GLRA1P23415 457 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 TAF9Q16594 264 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 VASH2Q86V25 355 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 PLPP5Q8NEB5 264 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 OR5H2Q8NGV7 314 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 OR14L1PQ8NHC6 308 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 POC1BQ8TC44 478 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 SCARB1Q8WTV0 552 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 PRRT1Q99946 306 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 ZNF768Q9H5H4 540 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 CYB5R1Q9UHQ9 305 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 PIGLQ9Y2B2 252 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 CSAG2Q9Y5P2 127 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 POLEQ07864 2286 aa12.09□□□□□ -0.47
PRPF40B-209ENST00000548825 MED19A0JLT2 244 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 TMEM200CA6NKL6 621 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 TO15178 435 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 FBXO24O75426 580 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 LCATP04180 440 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 RRADP55042 308 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 NHLRC3Q5JS37 347 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 LY6G6FQ5SQ64 297 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms