RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 OR52W1Q6IF63 320 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 GLIPR1L1Q6UWM5 242 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 FOXL2NBQ6ZUU3 175 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 DOK3Q7L591 496 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 CD163Q86VB7 1156 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 ZNF101Q8IZC7 436 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 LRRC18Q8N456 261 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 TMEM104Q8NE00 496 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 OR14K1Q8NGZ2 314 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 LYZL4Q96KX0 146 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 SELENOIQ9C0D9 397 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 MRPS28Q9Y2Q9 187 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 LINC00862A6NCI5 91 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 MCRIP1C9JLW8 97 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 F5H5P2 479 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 IFNA7P01567 189 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 GUCA1AP43080 201 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 B3GALT5-AS1P59052 145 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 DMRTC1Q5HYR2 192 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 DCAF12Q5T6F0 453 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 OR10R2Q8NGX6 335 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 CCDC107Q8WV48 283 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 PIGQQ9BRB3 760 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 RBM24Q9BX46 236 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 LPAR5Q9H1C0 372 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 FOXD3Q9UJU5 478 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 TCFL5Q9UL49 500 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 IGKV1-9A0A0C4DH69 117 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 RPS10-NUDT3A0A1W2PQS6 291 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 H3BUI4 141 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 RSPO1Q2MKA7 263 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 C17orf107Q6ZR85 190 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 TIPARPQ7Z3E1 657 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 DTX1Q86Y01 620 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 GJC3Q8NFK1 279 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 PCNPQ8WW12 178 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 SLC39A7Q92504 469 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 ZNF775Q96BV0 537 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 ZNF837Q96EG3 531 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 PGAM5Q96HS1 289 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 UBQLN2Q9UHD9 624 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 PADI1Q9ULC6 663 aa16.31■□□□□ 0.2
PRPF40B-208ENST00000548436 F5H5K5 113 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 L7N2F9 121 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 DHHO43323 396 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SSX5O60225 188 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 IGLV3-1P01715 115 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 IGHEP01854 428 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 HCKP08631 526 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 MEF2DQ14814 521 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 YRDCQ86U90 279 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SSC4DQ8WTU2 575 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 MRGPRFQ96AM1 343 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SGCZQ96LD1 299 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 MYOZ1Q9NP98 299 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 VSIG4Q9Y279 399 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 KCNK7Q9Y2U2 307 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 A0A1W2PP11 408 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 DISC1C4P0D8 188 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SMAD9O15198 467 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 TCN2P20062 427 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 GSK3AP49840 483 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SEC61A1P61619 476 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 HIST1H3AP68431 136 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 CXADRP78310 365 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 CHAF1BQ13112 559 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 MPPED2Q15777 294 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 RNASE10Q5GAN6 216 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 HIST2H3PS2Q5TEC6 136 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 HIST2H3AQ71DI3 136 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 CYYR1Q96J86 154 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SFXN2Q96NB2 322 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 NUDT16L1Q9BRJ7 211 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 SLC2A8Q9NY64 477 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 LOXL2Q9Y4K0 774 aa16.3■□□□□ 0.2
PRPF40B-208ENST00000548436 CDC14BO60729 498 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 SCGNO76038 276 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 MPIG6BO95866 241 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 SUCLG1P53597 346 aaKnown RBP16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 ESCO2Q56NI9 601 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 C11orf88Q6PI97 169 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 OR2W3Q7Z3T1 314 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 BEST3Q8N1M1 668 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 C12orf45Q8N5I9 185 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 RHBDD1Q8TEB9 315 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 CT55Q8WUE5 264 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 BANF2Q9H503 90 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 AUP1Q9Y679 476 aa16.29■□□□□ 0.2
PRPF40B-208ENST00000548436 HMSDA8MTL9 139 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 ARPC5O15511 151 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 SOCS1O15524 211 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 RGS11O94810 467 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 P04436 131 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 RFPL3SP0C7P2 107 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 SRD5A2P31213 254 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 HRH1P35367 487 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 CASRP41180 1078 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 SLC6A9P48067 706 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms