RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SLC9A3R2Q15599 337 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 OR52N5Q8NH56 324 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 CMTM2Q8TAZ6 248 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM106AQ96A25 262 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 SLAMF6Q96DU3 332 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 P4HTMQ9NXG6 502 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 LPAR3Q9UBY5 353 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 POMT2Q9UKY4 750 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 TMED3Q9Y3Q3 217 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 AMMECR1Q9Y4X0 333 aaPredicted RBP7.07□□□□□ -1.28
VPS13D-211ENST00000543710 CSAG2Q9Y5P2 127 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 KCNMB2Q9Y691 235 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 IFITM5A6NNB3 132 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 M0QZK8 103 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 P2RY10O00398 339 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 GGCTO75223 188 aaKnown RBP7.07□□□□□ -1.28
VPS13D-211ENST00000543710 RPA2P15927 270 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 CCKARP32238 428 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 SLC22A6Q4U2R8 563 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 TMPRSS11FQ6ZWK6 438 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 SIRT6Q8N6T7 355 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 C3orf56Q8N813 242 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 SLC24A4Q8NFF2 622 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 OR4Q3Q8NH05 313 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 PAAF1Q9BRP4 392 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 SORBS1Q9BX66 1292 aaKnown RBP7.07□□□□□ -1.28
VPS13D-211ENST00000543710 RHOFQ9HBH0 211 aa7.07□□□□□ -1.28
VPS13D-211ENST00000543710 DHCR7Q9UBM7 475 aaKnown RBP7.07□□□□□ -1.28
VPS13D-211ENST00000543710 FZD6O60353 706 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 LIMK1P53667 647 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 DLK1P80370 383 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 HOXA4Q00056 320 aaPredicted RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 PNRC1Q12796 327 aaPredicted RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 NKAIN2Q5VXU1 208 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SHISA6Q6ZSJ9 500 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 LIMS2Q7Z4I7 341 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 DCXRQ7Z4W1 244 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ZDHHC23Q8IYP9 409 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 CLRN3Q8NCR9 226 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SDF2Q99470 211 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF251Q9BRH9 671 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 REPIN1Q9BWE0 567 aaKnown RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SLC17A4Q9Y2C5 497 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ATAD5Q96QE3 1844 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM72A0PK05 275 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 RGS13O14921 159 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 PLPP2O43688 288 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 TOX4O94842 621 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 OR8G3PP0DMU2 310 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ATP5J2P56134 94 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 OR1C1Q15619 314 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 COX20Q5RI15 118 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 RPL7L1Q6DKI1 246 aaKnown RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SYT9Q86SS6 491 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 EXTL1Q92935 676 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 DDA1Q9BW61 102 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 OR14J1Q9UGF5 321 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 IGLV3-16A0A075B6K0 115 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF816-ZNF321PA0A0X1KG74 233 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 LOC107986453A0A1B0GWG9 222 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SOCS6O14544 535 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ICMTO60725 284 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 CST4P01036 141 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 OR4E1P0C645 316 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 TNFRSF1AP19438 455 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 NKX2-5P52952 324 aaPredicted RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 UBE2G1P62253 170 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 RNPS1Q15287 305 aaKnown RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 IER5LQ5T953 404 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 BAGE3Q86Y29 109 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 BAGE2Q86Y30 109 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 PTX4Q96A99 478 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SDSLQ96GA7 329 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 RAB40CQ96S21 281 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 CCL19Q99731 98 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 C20orf27Q9GZN8 174 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 PBOV1Q9GZY1 135 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SIRT7Q9NRC8 400 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF586Q9NXT0 402 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 TCFL5Q9UL49 500 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SELENOFO60613 162 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 CLDN1O95832 211 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 IGF2P01344 180 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 MMP9P14780 707 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 HMGA2P52926 109 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 DUSP5Q16690 384 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 RAB6CQ53S08 254 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 OR2G6Q5TZ20 316 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 STAC2Q6ZMT1 411 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 HSD17B13Q7Z5P4 300 aaPredicted RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SAT2Q96F10 170 aaPredicted RBP7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ANGPTL4Q9BY76 406 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 RAB6CQ9H0N0 254 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 ARV1Q9H2C2 271 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 CYSLTR2Q9NS75 346 aa7.06□□□□□ -1.28
VPS13D-211ENST00000543710 SLC22A20A6NK97 555 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 PPP5D1E7EU14 171 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CTDSP2O14595 271 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 HOXB5P09067 269 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms