RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CSAG2Q9Y5P2 127 aa13.52□□□□□ -0.25
CLPTM1-202ENST00000541297 SP1P08047 785 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 ALOX5APP20292 161 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 SOX2P48431 317 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 CLDN17P56750 224 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 CSNK2A1P68400 391 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 CLN3Q13286 438 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 RBMS2Q15434 407 aaKnown RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 GLB1L2Q8IW92 636 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF775Q96BV0 537 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF552Q9H707 407 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 GJE1A6NN92 205 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 DNASE2O00115 360 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 PLGLB1Q02325 96 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF684Q5T5D7 378 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 EIF4E3Q8N5X7 224 aaKnown RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 OTOSQ8NHW6 89 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 SLC25A44Q96H78 314 aaPredicted RBP13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF416Q9BWM5 594 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 TCF7L1Q9HCS4 588 aa13.51□□□□□ -0.25
CLPTM1-202ENST00000541297 RBBP9O75884 186 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 GLSO94925 669 aaPredicted RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 PGA4P0DJD7 388 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 PGA3P0DJD8 388 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 SPINK2P20155 84 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 EIF1AXP47813 144 aaKnown RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 MEOX1P50221 254 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 ARHGDIBP52566 201 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 SORDQ00796 357 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 MDS2Q8NDY4 140 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 FDCSPQ8NFU4 85 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 MRPL48Q96GC5 212 aaKnown RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 MRPL13Q9BYD1 178 aaKnown RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 MFFQ9GZY8 342 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 TMEM138Q9NPI0 162 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 A0A1B0GTH9 108 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 TMEM272A0A1B0GTI8 110 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 EIF1BO60739 113 aaKnown RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 IGHG1P01857 330 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 CARD18P57730 90 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 NHLH1Q02575 133 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF169Q14929 603 aaPredicted RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 RTP5Q14D33 572 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 LIPNQ5VXI9 398 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 DNM1P34Q6PK57 102 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 LRRN1Q6UXK5 716 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 FAM220AQ7Z4H9 259 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 LINC00346Q8IVM7 164 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 NOXO1Q8NFA2 376 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF385AQ96PM9 386 aaKnown RBP13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 PCDHB16Q9NRJ7 776 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 B4GALT7Q9UBV7 327 aa13.5□□□□□ -0.25
CLPTM1-202ENST00000541297 MEIS3P1A6NDR6 274 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF726A6NNF4 738 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 NPIPA2E9PIF3 369 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 NPIPA3F8WFD2 350 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 H3BSH0 61 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 CXCL13O43927 109 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 WNT11O96014 354 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 GFRA1P56159 465 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 CLDN15P56746 228 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 GMFBP60983 142 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 MFAP5Q13361 173 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 DEFB109BQ30KR1 87 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 C11orf88Q6PI97 169 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 DNM1P46Q6ZS02 220 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 LINC00518Q8N0U6 118 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 SLC26A10Q8NG04 563 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 TNFAIP8L1Q8WVP5 186 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 ROBO4Q8WZ75 1007 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 CHST6Q9GZX3 395 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 SLC6A15Q9H2J7 730 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 SMAD9O15198 467 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 NME2P1O60361 137 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 AQP8O94778 261 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 MAS1P04201 325 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 NME2P22392 152 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 MPGP29372 298 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 FAUP35544 74 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 GUCA2AQ02747 115 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 SRYQ05066 204 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 EIF2B1Q14232 305 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF239Q16600 458 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 CORO6Q6QEF8 472 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 PLXDC2Q6UX71 529 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 TMEM251Q8N6I4 163 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 OR6K3Q8NGY3 331 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 OR10D3Q8NH80 312 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 ST8SIA2Q92186 375 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 NAA11Q9BSU3 229 aaPredicted RBP13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 TMEM14AQ9Y6G1 99 aa13.49□□□□□ -0.25
CLPTM1-202ENST00000541297 FAM74A7A6NL05 159 aa13.48□□□□□ -0.25
CLPTM1-202ENST00000541297 H7C417 338 aa13.48□□□□□ -0.25
CLPTM1-202ENST00000541297 CD46P15529 392 aa13.48□□□□□ -0.25
CLPTM1-202ENST00000541297 ZNF823P16415 610 aa13.48□□□□□ -0.25
CLPTM1-202ENST00000541297 CDAP32320 146 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms