RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C16orf89Q6UX73 402 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 Q6YL49 198 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SPERTQ8NA61 448 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CCDC197Q8NCU1 140 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 DDOQ99489 341 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TNFRSF19Q9NS68 423 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CD300AQ9UGN4 299 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TRAV38-1A0A0B4J264 116 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 A0A1B0GUS0 222 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 FAM181BA6NEQ2 426 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ADAM20O43506 726 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 NDUFA2O43678 99 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TOX4O94842 621 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 MZT1Q08AG7 82 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNF362Q5T0B9 420 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RUSC1-AS1Q66K80 236 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 DCXRQ7Z4W1 244 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 LINC00471Q8N535 108 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 PNLDC1Q8NA58 520 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNRF4Q8WWF5 429 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CDRT15Q96T59 188 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 COPS4Q9BT78 406 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 C1orf123Q9NWV4 160 aa16.33■□□□□ 0.2
TNFRSF1B-204ENST00000536782 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 C5orf63A6NC05 138 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OOEPA6NGQ2 149 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TNFRSF13BO14836 293 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SFTPBP07988 381 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ANOS1P23352 680 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 HMGA2P52926 109 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 PRKDCP78527 4128 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TAF13Q15543 124 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 FIP1L1Q6UN15 594 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 LYPD4Q6UWN0 246 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TMEM86BQ8N661 226 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR51L1Q8NGJ5 315 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 FAM71F1Q96KD3 344 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TBX15Q96SF7 602 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 KCNJ15Q99712 375 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OPA3Q9H6K4 179 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 MARCH7Q9H992 704 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 BEX1Q9HBH7 125 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 C14orf119Q9NWQ9 140 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 IL20Q9NYY1 176 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 COMMD3-BMI1R4GMX3 469 aa16.32■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CENPVL3A0A0U1RRI6 287 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 A6NLC8 198 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TNFRSF11BO00300 401 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 KNG1P01042 644 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GRPP07492 148 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SPARCP09486 303 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 PSKH1P11801 424 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 MMP9P14780 707 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 FMO3P31513 532 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 PRKXP51817 358 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 METTL11BQ5VVY1 283 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNF826PQ6ZT77 177 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 LNX2Q8N448 690 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SLC37A3Q8NCC5 494 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR9Q2Q8NGE9 314 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR56B2PQ8NGI1 322 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR9Q1Q8NGQ5 310 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR4F5Q8NH21 305 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GATAD2BQ8WXI9 593 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SLAMF6Q96DU3 332 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 WDFY2Q96P53 400 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 BTBD10Q9BSF8 475 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RASSF4Q9H2L5 321 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SMURF1Q9HCE7 757 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CENPMQ9NSP4 180 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 N6AMT1Q9Y5N5 214 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 LYVE1Q9Y5Y7 322 aa16.31■□□□□ 0.2
TNFRSF1B-204ENST00000536782 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 XRCC2O43543 280 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GYPAP02724 150 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 MELTFP08582 738 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SLC2A1P11166 492 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ENTPD1P49961 510 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RAG2P55895 527 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 MXRA7P84157 204 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 PCK2Q16822 640 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 C17orf107Q6ZR85 190 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RASSF6Q6ZTQ3 369 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 DEFB107AQ8IZN7 70 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GCSAMQ8N6F7 178 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 KIR3DL3Q8N743 410 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR8D4Q8NGM9 314 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 NSL1Q96IY1 281 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CHIAQ9BZP6 476 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TRIM15Q9C019 465 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TBC1D23Q9NUY8 699 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 POMT1Q9Y6A1 747 aa16.3■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ANKRD30BLA7E2S9 258 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNF878C9JN71 531 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNF593O00488 134 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GASTP01350 101 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 DDOSTP39656 456 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 PDCD1Q15116 288 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 C11orf91Q3C1V1 193 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms