RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 DUX4L4P0CJ87 422 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DUX4L5P0CJ88 424 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DUX4L6P0CJ89 424 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DUX4L7P0CJ90 424 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 ZNF16P17020 682 aaPredicted RBP11.97□□□□□ -0.49
GPC1-209ENST00000495100 FASLGP48023 281 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 CSNK1A1P48729 337 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 HAGHLQ6PII5 290 aaPredicted RBP11.97□□□□□ -0.49
GPC1-209ENST00000495100 SYT13Q7L8C5 426 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DUX4Q9UBX2 424 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 PIGLQ9Y2B2 252 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 ZNF814B7Z6K7 855 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 B4GALT1P15291 398 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 GALP22466 123 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 SLC25A1P53007 311 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 SWI5Q1ZZU3 235 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 PDSS1Q5T2R2 415 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 ASB17Q8WXJ9 295 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 FBXW5Q969U6 566 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 ULBP2Q9BZM5 246 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 ESRP2Q9H6T0 727 aaKnown RBP11.96□□□□□ -0.49
GPC1-209ENST00000495100 VSIG4Q9Y279 399 aa11.96□□□□□ -0.49
GPC1-209ENST00000495100 GPR31O00270 319 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 PHYHO14832 338 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 ZFAND5O76080 213 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 NMBP08949 121 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 IQCF2Q8IXL9 164 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 PXT1Q8NFP0 134 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 KCNK7Q9Y2U2 307 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 TICRRQ7Z2Z1 1910 aa11.96□□□□□ -0.5
GPC1-209ENST00000495100 B8ZZF3 427 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 M0R036 132 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 TNFSF11O14788 317 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 OR7C1O76099 320 aaPredicted RBP11.95□□□□□ -0.5
GPC1-209ENST00000495100 ABHD16AO95870 558 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 PDGFBP01127 241 aaPredicted RBP11.95□□□□□ -0.5
GPC1-209ENST00000495100 ID4P47928 161 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 CCR5P51681 352 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 TMEM71Q6P5X7 295 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 LINC00114Q6XXX2 140 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 C15orf40Q8WUR7 153 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 PAPOLGQ9BWT3 736 aaKnown RBP11.95□□□□□ -0.5
GPC1-209ENST00000495100 THADAQ6YHU6 1953 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 VSIG8P0DPA2 414 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 RBMXP38159 391 aaKnown RBP11.95□□□□□ -0.5
GPC1-209ENST00000495100 MRPS10P82664 201 aaKnown RBP11.95□□□□□ -0.5
GPC1-209ENST00000495100 SLC25A24Q6NUK1 477 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 GDF15Q99988 308 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 ZNF416Q9BWM5 594 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 MMACHCQ9Y4U1 282 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 ABCA4P78363 2273 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 MS4A18H0YCH9 400 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 BET1O15155 118 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 RAB6AP20340 208 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 PNLIPRP2P54317 469 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 RSU1Q15404 277 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 MS4A18Q3C1V0 323 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 CLLU1Q5K131 121 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 OR51F2Q8NH61 342 aa11.95□□□□□ -0.5
GPC1-209ENST00000495100 ZNF385AQ96PM9 386 aaKnown RBP11.95□□□□□ -0.5
GPC1-209ENST00000495100 A0A1W2PPC1 479 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 GLB1P16278 677 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 IL10RAQ13651 578 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 HACD4Q5VWC8 232 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 LINC00696Q6ZRV3 163 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 C5orf24Q7Z6I8 188 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 HSD17B11Q8NBQ5 300 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 CD300LFQ8TDQ1 290 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 ZNF837Q96EG3 531 aaPredicted RBP11.94□□□□□ -0.5
GPC1-209ENST00000495100 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
GPC1-209ENST00000495100 MEGF11A6BM72 1044 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 SULT1B1O43704 296 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 EIF4E2O60573 245 aaKnown RBP11.94□□□□□ -0.5
GPC1-209ENST00000495100 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
GPC1-209ENST00000495100 TTRP02766 147 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 GABRA1P14867 456 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 ANOS1P23352 680 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 UNQ9370/PRO34162Q6UXP9 181 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 P4HA3Q7Z4N8 544 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 CLEC1AQ8NC01 280 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 OR5L1Q8NGL2 311 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 CCDC74BQ96LY2 380 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 CDC6Q99741 560 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 WDR13Q9H1Z4 485 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 PPA2Q9H2U2 334 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 MTCH2Q9Y6C9 303 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 COL6A6A6NMZ7 2263 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 ZNF106Q9H2Y7 1883 aaKnown RBP11.94□□□□□ -0.5
GPC1-209ENST00000495100 IGLV1-36A0A0B4J1U3 117 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 MT-ATP6P00846 226 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 SRFP11831 508 aa11.94□□□□□ -0.5
GPC1-209ENST00000495100 CBLN2Q8IUK8 224 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms