RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MUC1P15941 1255 aaPredicted RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 PGAM1P18669 254 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 TSPAN8P19075 237 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 TNNI1P19237 187 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 OGNP20774 298 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 KDELR1P24390 212 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 STOMP27105 288 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 CRABP1P29762 137 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SLC6A1P30531 599 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 MAGEA2P43356 314 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 KIR3DL2P43630 455 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 MAP2K4P45985 399 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 CSNK1EP49674 416 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 STK19P49842 368 aaPredicted RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 RBP2P50120 134 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 KPNA2P52292 529 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 PRRX1P54821 245 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 RAB5BP61020 215 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 OSTNP61366 133 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 LSM3P62310 102 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 PPP3R1P63098 170 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SLC25A11Q02978 314 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 CHRNB3Q05901 458 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SMCO1Q147U7 214 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 TAF1AQ15573 450 aaPredicted RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 HADHQ16836 314 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 VPS26BQ4G0F5 336 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 OR2B11Q5JQS5 317 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SPANXN3Q5MJ09 141 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 AVPI1Q5T686 147 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 GPRC6AQ5T6X5 926 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ANXA8L1Q5VT79 327 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ASPHD2Q6ICH7 369 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 OR4F3Q6IEY1 312 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SLC39A4Q6P5W5 647 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ERICH5Q6P6B1 374 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 BAIAP2L2Q6UXY1 529 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF562Q6V9R5 426 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ADAMTSL5Q6ZMM2 481 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 RASSF6Q6ZTQ3 369 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 FAM92BQ6ZTR7 304 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 MRPL52Q86TS9 123 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 FUNDC1Q8IVP5 155 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 PDZD9Q8IXQ8 264 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SVBPQ8N300 66 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 AKR7LQ8NHP1 331 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 AP3S1Q92572 193 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ISG20Q96AZ6 181 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 EXOSC8Q96B26 276 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 FAF2Q96CS3 445 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 MRPS24Q96EL2 167 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SLC41A3Q96GZ6 507 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 NARS2Q96I59 477 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 C14orf144Q96I85 54 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ZBED3Q96IU2 234 aaPredicted RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 OR4F4Q96R69 305 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 RBBP8Q99708 897 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 MRPL57Q9BQC6 102 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 C7orf50Q9BRJ6 194 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 TMEM43Q9BTV4 400 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 TRIM62Q9BVG3 475 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 TMED9Q9BVK6 235 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 ACTR6Q9GZN1 396 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 CCDC90BQ9GZT6 254 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 MED28Q9H204 178 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 FAM120CQ9NX05 1096 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 GALPQ9UBC7 116 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 UXTQ9UBK9 157 aaPredicted RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SEC14L3Q9UDX4 400 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 PRODH2Q9UF12 536 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 CYTH4Q9UIA0 394 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 CARHSP1Q9Y2V2 147 aaKnown RBP2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SPACA6W5XKT8 324 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 COL1A2P08123 1366 aa2.94□□□□□ -1.94
ECHDC1-217ENST00000488087 SHANK3Q9BYB0 1731 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 KIAA1551Q9HCM1 1747 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TAF1LQ8IZX4 1826 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 CROCCQ5TZA2 2017 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 AGRNO00468 2067 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MYH9P35579 1960 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 A0A0J9YYE9 177 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 FAM240BA0A1B0GVZ2 78 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 TMEM218A2RU14 115 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 FABP12A6NFH5 140 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 HMSDA8MTL9 139 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 HSBP1L1C9JCN9 74 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 H0YIV9 168 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 H3BMH7 237 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MKRN2OSH3BPM6 223 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 SAP18O00422 153 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ITGB1BP1O14713 200 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 ZNF264O43296 627 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 LYRM1O43325 122 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 MED7O43513 233 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 LCMT2O60294 686 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 RAMP1O60894 148 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 B4GALT2O60909 372 aa2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 EEDO75530 441 aaKnown RBP2.93□□□□□ -1.94
ECHDC1-217ENST00000488087 WBP4O75554 376 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms