RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SCML4Q8N228 414 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 MUC20Q8N307 709 aaPredicted RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 C5orf17Q8NAS9 161 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 MRPL30Q8TCC3 161 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 KAZALD1Q96I82 304 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 OR6C1Q96RD1 312 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PCYT2Q99447 389 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 NSUN3Q9H649 340 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 FANCMQ8IYD8 2048 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 A0A1B0GWB2 263 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 AQP7O14520 342 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PLPP2O43688 288 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 ZBTB25P24278 435 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PRSS8Q16651 343 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 DUSP18Q8NEJ0 188 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 OR4B1Q8NGF8 309 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 OR10AG1Q8NH19 301 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 SNRNP40Q96DI7 357 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 PHRF1Q9P1Y6 1649 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 TMEM272A0A1B0GTI8 110 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 TMEM235A6NFC5 223 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 M0QYG6 137 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 NAPSAO96009 420 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 CNR2P34972 360 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PXNP49023 591 aaPredicted RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 ZNF415Q09FC8 603 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 EML3Q32P44 896 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 ZNF322Q6U7Q0 402 aaPredicted RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 ALYREFQ86V81 257 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 DNAJC30Q96LL9 226 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 ANGPTL4Q9BY76 406 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 CXXC4Q9H2H0 198 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 A0A0B4J2A0 478 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PGPA6NDG6 321 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 HAX1O00165 279 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PGA4P0DJD7 388 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 PGA5P0DJD9 388 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 FNDC7Q5VTL7 733 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 ZNF765Q7L2R6 523 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 CHST6Q9GZX3 395 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 ZNF552Q9H707 407 aaPredicted RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 TMEM38BQ9NVV0 291 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 SHPKQ9UHJ6 478 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 TRAPPC1Q9Y5R8 145 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 SNX11Q9Y5W9 270 aa4.96□□□□□ -1.62
USF3-202ENST00000478658 CLTCQ00610 1675 aaKnown RBP4.96□□□□□ -1.62
USF3-202ENST00000478658 TARBP1Q13395 1621 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 TMEM30CPA0ZSE6 113 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR2A25A4D2G3 310 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 RFPL4AA6NLU0 287 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CXorf49A8MYA2 514 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 RFPL4AL1F8VTS6 287 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 AGPAT2O15120 278 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 PIPP12273 146 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 SNRPD3P62318 126 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 RBMY1FQ15415 496 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 NCCRP1Q6ZVX7 275 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 TMEM86BQ8N661 226 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ACOT4Q8N9L9 421 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 UBAC2Q8NBM4 344 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 C14orf79Q96F83 325 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SMIM7Q9BQ49 75 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SYT17Q9BSW7 474 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SMOC2Q9H3U7 446 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 DMAC2Q9NW81 257 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TECRQ9NZ01 308 aaKnown RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 DNAJC27Q9NZQ0 273 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CNIH4Q9P003 139 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 KCNK6Q9Y257 313 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 PRR36Q9H6K5 1346 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 FMN2Q9NZ56 1722 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 A0A1W2PPQ1 181 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ARRDC5A6NEK1 342 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 FAM74A7A6NL05 159 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 C17orf105B2RV13 164 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 DPM2O94777 84 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 PF4V1P10720 104 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SQSTM1Q13501 440 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR8G2PQ6IF36 304 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 DPPA3Q6W0C5 159 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 CLEC17AQ6ZS10 378 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR8B3Q8NGG8 313 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OR13G1Q8NGZ3 307 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 R3HDM4Q96D70 268 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 DTD2Q96FN9 168 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 FAM71F1Q96KD3 344 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 OR8B2Q96RD0 313 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 METTL26Q96S19 204 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 MS4A6AQ9H2W1 248 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 OSGIN1Q9UJX0 560 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 ROBO2Q9HCK4 1378 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 TMEM269A0A1B0GVZ9 245 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 hADV38S2A0JD32 116 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 GPANK1O95872 356 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 HOXD4P09016 255 aaPredicted RBP4.95□□□□□ -1.62
USF3-202ENST00000478658 ASAH2BP0C7U1 165 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 RPA2P15927 270 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 SPNP16150 400 aa4.95□□□□□ -1.62
USF3-202ENST00000478658 RARRES1P49788 294 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms