RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CSNK1G2P78368 415 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 PAX5Q02548 391 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 ALG10BQ5I7T1 473 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 Q6ZNB5 142 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 OR4K15Q8NH41 348 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 NIPSNAP3BQ9BS92 247 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 CLEC4EQ9ULY5 219 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 TMEM14AQ9Y6G1 99 aa12.35□□□□□ -0.43
HDAC1-206ENST00000476391 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 ITGB1BP1O14713 200 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 CHRM2P08172 466 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-206ENST00000476391 ALOX5APP20292 161 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 C4orf17Q53FE4 359 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 ARSJQ5FYB0 599 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-206ENST00000476391 DCST2Q5T1A1 773 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 ABHD17CQ6PCB6 329 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 ZNF429Q86V71 674 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 OR8G5Q8NG78 346 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 NEK7Q8TDX7 302 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 MS4A6EQ96DS6 147 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 MRGPRX4Q96LA9 322 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 RARRES2Q99969 163 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 NCOR1P1Q9H4R4 102 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 C6orf106Q9H6K1 298 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-206ENST00000476391 WDR76Q9H967 626 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 MKKSQ9NPJ1 570 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-206ENST00000476391 VAX2Q9UIW0 290 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 DHDHQ9UQ10 334 aa12.34□□□□□ -0.43
HDAC1-206ENST00000476391 WIPF3A6NGB9 483 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 FIGNL2A6NMB9 653 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 SERPINA2P20848 420 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 FPR2P25090 351 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 PSMB5P28074 263 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 CENPFP49454 3210 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 ZIC1Q15915 447 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 VAX1Q5SQQ9 334 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 C1orf194Q5T5A4 169 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 APCDD1LQ8NCL9 501 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 GPX7Q96SL4 187 aaPredicted RBP12.33□□□□□ -0.43
HDAC1-206ENST00000476391 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.43
HDAC1-206ENST00000476391 TRIM2Q9C040 744 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 GAL3ST2Q9H3Q3 398 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 CDH20Q9HBT6 801 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 SUSD2Q9UGT4 822 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 RAB22AQ9UL26 194 aa12.33□□□□□ -0.43
HDAC1-206ENST00000476391 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 KIR2DL5BA0A0G2JN68 375 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 KIR2DL5BA0A0G2JPC4 375 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 H0YL77 283 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 H7C4K7 107 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 HSPA12AO43301 675 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 SCGNO76038 276 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 SRP19P09132 144 aaKnown RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 RPS2P15880 293 aaKnown RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 GJA4P35212 333 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 GABRA4P48169 554 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 MMP16P51512 607 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 PRPS1P60891 318 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 CLLU1OSQ5K130 101 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 KIR2DL5AQ8N109 375 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 MENTQ9BUN1 341 aa12.33□□□□□ -0.44
HDAC1-206ENST00000476391 CGGBP1Q9UFW8 167 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 YLPM1P49750 1951 aaKnown RBP12.33□□□□□ -0.44
HDAC1-206ENST00000476391 EOMESO95936 686 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
HDAC1-206ENST00000476391 PLAURQ03405 335 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 TLE4Q04727 773 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 C1orf100Q5SVJ3 147 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 SLC25A26Q70HW3 274 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 Q7L0L9 218 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 SLC16A14Q7RTX9 510 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 OR2L2Q8NH16 312 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 ZNF514Q96K75 400 aaPredicted RBP12.32□□□□□ -0.44
HDAC1-206ENST00000476391 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 C4orf51C9J302 202 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 K7N7A8 449 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
HDAC1-206ENST00000476391 C1QL1O75973 258 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 KAT7O95251 611 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 CST2P09228 141 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 PGA3P0DJD8 388 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 APOBEC1P41238 236 aaKnown RBP12.32□□□□□ -0.44
HDAC1-206ENST00000476391 CLDN6P56747 220 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 FBXW9Q5XUX1 488 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 DLK2Q6UY11 383 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 NRSN1Q8IZ57 195 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 LRRC25Q8N386 305 aaPredicted RBP12.32□□□□□ -0.44
HDAC1-206ENST00000476391 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms