RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 TET1Q8NFU7 2136 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-214ENST00000457270 A0A1B0GW64 132 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 TBC1D3HP0C7X1 549 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 DANCRP0C864 163 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 RPL12P30050 165 aaKnown RBP12.59□□□□□ -0.39
TOP3B-214ENST00000457270 IL2RGP31785 369 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 DNASE1L1P49184 302 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 PEG10Q86TG7 708 aaKnown RBP12.59□□□□□ -0.39
TOP3B-214ENST00000457270 ZNF615Q8N8J6 731 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 CHST4Q8NCG5 386 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 NKD1Q969G9 470 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 RELTQ969Z4 430 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 MVB12AQ96EY5 273 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 METTL8Q9H825 291 aaKnown RBP12.59□□□□□ -0.39
TOP3B-214ENST00000457270 MMP25Q9NPA2 562 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 KCNJ16Q9NPI9 418 aa12.59□□□□□ -0.39
TOP3B-214ENST00000457270 EDDM13A0A1B0GTR0 161 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HNRNPA1L2Q32P51 320 aaKnown RBP12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-214ENST00000457270 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 RNF44Q7L0R7 432 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 BEND2Q8NDZ0 799 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 OR5R1Q8NH85 324 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-214ENST00000457270 ZNF558Q96NG5 402 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 GNRHR2Q96P88 292 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 FBXL17Q9UF56 701 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 PRR19A6NJB7 356 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 FOXS1O43638 330 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 CSTAP01040 98 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 PNMTP11086 282 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 CD200P41217 278 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 SUCLG1P53597 346 aaKnown RBP12.58□□□□□ -0.4
TOP3B-214ENST00000457270 S100A10P60903 97 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 QRFPP83859 136 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 RPL18Q07020 188 aaKnown RBP12.58□□□□□ -0.4
TOP3B-214ENST00000457270 ZNF77Q15935 545 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 FBXO42Q6P3S6 717 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 FOXRED2Q8IWF2 684 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 C10orf53Q8N6V4 93 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 TMEM52Q8NDY8 209 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 OR4N2Q8NGD1 307 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 LPAR4Q99677 370 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 CNTNAP3Q9BZ76 1288 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 HHLA2Q9UM44 414 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 WNT6Q9Y6F9 365 aa12.58□□□□□ -0.4
TOP3B-214ENST00000457270 K7EPK0 472 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 TOX3O15405 576 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 LATO43561 262 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 PTBP3O95758 552 aaKnown RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 ZNF708P17019 499 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 FGF7P21781 194 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 FPR2P25090 351 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 IGFALSP35858 605 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 UNC119Q13432 240 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 ZNHIT3Q15649 155 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 FAM71E2Q8N5Q1 922 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 CSNK1A1LQ8N752 337 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 NAXEQ8NCW5 288 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 SEMA6DQ8NFY4 1073 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 OR13C3Q8NGS6 347 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 PBDC1Q9BVG4 233 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 LUZP4Q9P127 313 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 CYR61O00622 381 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 CTSVO60911 334 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 FCARP24071 287 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 DHPSP49366 369 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 ENPP2Q13822 863 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 THEM4Q5T1C6 240 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 KCTD18Q6PI47 426 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-214ENST00000457270 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 LRRC18Q8N456 261 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 SLC25A36Q96CQ1 311 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 NTNG2Q96CW9 530 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 OR2A5Q96R48 311 aa12.57□□□□□ -0.4
TOP3B-214ENST00000457270 PARP12Q9H0J9 701 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms