RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ERMAPQ96PL5 475 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 NMNAT3Q96T66 252 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 KCTD14Q9BQ13 255 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 ELAC2Q9BQ52 826 aaKnown RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 RBM4Q9BWF3 364 aaKnown RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 MS4A7Q9GZW8 240 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 FN3KQ9H479 309 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 EFCAB1Q9HAE3 211 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 NRIP3Q9NQ35 241 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 UFSP2Q9NUQ7 469 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 ARGLU1Q9NWB6 273 aaPredicted RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF446Q9NWS9 450 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 IL19Q9UHD0 177 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 RPS6KA6Q9UK32 745 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 NUP50Q9UKX7 468 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 B9D1Q9UPM9 204 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 AURKCQ9UQB9 309 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 FAM32AQ9Y421 112 aaKnown RBP3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 ENPP4Q9Y6X5 453 aa3.92□□□□□ -1.78
GTF3C3-208ENST00000455546 PPIAL4EA0A075B759 164 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PPIAL4CA0A0B4J2A2 164 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 A0A1W2PRQ8 180 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HTR3EA5X5Y0 456 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 OR6C68A6NDL8 312 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 DNAJC9-AS1A6NH13 148 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 CEACAM18A8MTB9 384 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 F5H0A9 414 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PPIAL4DF5H284 164 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 H3BSA7 217 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 MLNRO43193 412 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PPIAL4FP0DN26 164 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HKR1P10072 659 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HIST1H1CP16403 213 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PRTN3P24158 256 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 FPR3P25089 353 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 MDH1P40925 334 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 MDH2P40926 338 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 RPS27P42677 84 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 NUDT2P50583 147 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 RPS6KA3P51812 740 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PSME3P61289 254 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 LSM6P62312 80 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HIST1H3AP68431 136 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PAX2Q02962 417 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 MAB21L1Q13394 359 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 DGCR6Q14129 220 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC9A3R2Q15599 337 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 MPPED2Q15777 294 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 RFX4Q33E94 735 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 TMEM155Q4W5P6 130 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 ESCO2Q56NI9 601 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HIST2H3PS2Q5TEC6 136 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 GPR139Q6DWJ6 353 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC27A4Q6P1M0 643 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 LEG1Q6P5S2 330 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SMARCD3Q6STE5 483 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 BRD3OSQ6XYD6 125 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 DPY19L2P2Q6ZN68 376 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 CFAP77Q6ZQR2 320 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 Q6ZRM9 215 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HIST2H3AQ71DI3 136 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 DOK3Q7L591 496 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 CYP4Z1Q86W10 505 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 C1orf174Q8IYL3 243 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SPICQ8N5J4 248 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 TEX29Q8N6K0 151 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 BOLLQ8N9W6 283 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 NPEPL1Q8NDH3 523 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 GJC3Q8NFK1 279 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 OR13G1Q8NGZ3 307 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SGMS2Q8NHU3 365 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNRF4Q8WWF5 429 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 POP5Q969H6 163 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 APOBEC3DQ96AK3 386 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SLCO4A1Q96BD0 722 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 RSRC1Q96IZ7 334 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 C7orf34Q96L11 122 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF582Q96NG8 517 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 PITX2Q99697 317 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 HOPXQ9BPY8 73 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC30A2Q9BRI3 323 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 TMEM246Q9BRR3 403 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF747Q9BV97 191 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 SSBP3Q9BWW4 388 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 NSRP1Q9H0G5 558 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 NTN4Q9HB63 628 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 RPRD1BQ9NQG5 326 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 DCAF13Q9NV06 445 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 TMEM100Q9NV29 134 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 ADA2Q9NZK5 511 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 VSX1Q9NZR4 365 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 POLR1DQ9Y2S0 133 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 N6AMT1Q9Y5N5 214 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 LHFPL6Q9Y693 200 aa3.91□□□□□ -1.78
GTF3C3-208ENST00000455546 IGLV1-36A0A0B4J1U3 117 aa3.9□□□□□ -1.79
GTF3C3-208ENST00000455546 TVP23AA6NH52 213 aa3.9□□□□□ -1.79
GTF3C3-208ENST00000455546 IQCF6A8MYZ5 107 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms