RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 A0A1W2PPC4 97 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 PRAMEF4O60810 478 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 EIF1P41567 113 aaKnown RBP17.81■□□□□ 0.44
SHANK1-203ENST00000391813 CD81P60033 236 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 COTL1Q14019 142 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF273Q14593 569 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 OR8U1Q8NH10 309 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 SEMA6CQ9H3T2 930 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 FGF21Q9NSA1 209 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 PIGLQ9Y2B2 252 aa17.81■□□□□ 0.44
SHANK1-203ENST00000391813 NUP214P35658 2090 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 A0A1W2PPC1 479 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 A0A1W2PPQ1 181 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 SERPINE3A8MV23 424 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 DUS4LO95620 317 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 FPR2P25090 351 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 SUMO1P63165 101 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF90Q03938 601 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 FAM162BQ5T6X4 162 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 FAHD2BQ6P2I3 314 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 CHAC2Q8WUX2 184 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 FAHD2AQ96GK7 314 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 ZNF275Q9NSD4 429 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 MMP24Q9Y5R2 645 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 IRF2P14316 349 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 TLE1Q04724 770 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 INSL4Q14641 139 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 TMEM196Q5HYL7 178 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 TMEM268Q5VZI3 342 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 PRSS54Q6PEW0 395 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 LIMS2Q7Z4I7 341 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 LRRC18Q8N456 261 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 WWTR1Q9GZV5 400 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 PRSS37A4D1T9 235 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 MGST1P10620 155 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 MAT1AQ00266 395 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 S100A7AQ86SG5 101 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 OR51E1Q8TCB6 317 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 MCTS1Q9ULC4 181 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 WSB1Q9Y6I7 421 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 POM121BA6NF01 834 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 ARPC3O15145 178 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 DTYMKP23919 212 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 FKBP2P26885 142 aaKnown RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 MSX1P28360 303 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 SLC39A7Q92504 469 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 MAP3K3Q99759 626 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 ACTR3CQ9C0K3 210 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-203ENST00000391813 NTMQ9P121 344 aa17.8■□□□□ 0.44
SHANK1-203ENST00000391813 LRRC37AA6NMS7 1700 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 J3QR89 54 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 OPN1LWP04000 364 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 ARG2P78540 354 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 GGNBP1Q5YKI7 109 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 DMBX1Q8NFW5 382 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 WBP2Q969T9 261 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 RPUSD4Q96CM3 377 aaKnown RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 NTNG2Q96CW9 530 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 CDX2Q99626 313 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 PPP1R3EQ9H7J1 279 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 TNS1Q9HBL0 1735 aaKnown RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 FGF22Q9HCT0 170 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 ANGPTL7O43827 346 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 RBP2P50120 134 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 SLC25A1P53007 311 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 DCDP81605 110 aaKnown RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 TGFBR3Q03167 851 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 VAMP3Q15836 100 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 OR8G2PQ6IF36 304 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 NUDT9Q9BW91 350 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 SBF2Q86WG5 1849 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 SMCHD1A6NHR9 2005 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 PTGER4P35408 488 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 FOXK1P85037 733 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 Q3ZCU0 254 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 FAM219BQ5XKK7 198 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 SLC25A43Q8WUT9 341 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 TM7SF3Q9NS93 570 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 ZFPL1O95159 310 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 OLFM2O95897 454 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 GP1BAP07359 652 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 FABP6P51161 128 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 RAE1P78406 368 aaKnown RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 INPP5JQ15735 1006 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 MARCH3Q86UD3 253 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 OR4F5Q8NH21 305 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 LINC00615Q96LM1 132 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 OR4F4Q96R69 305 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 OR8B4Q96RC9 309 aa17.79■□□□□ 0.44
SHANK1-203ENST00000391813 LYRM2Q9NU23 88 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-203ENST00000391813 TRBV11-1A0A0K0K1C0 115 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 SLC2A1P11166 492 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 G0S2P27469 103 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 ABCD3P28288 659 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 PPP1R1AQ13522 171 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 LIPHQ8WWY8 451 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 CCDC74AQ96AQ1 378 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 FER1L6-AS2Q96M78 137 aa17.78■□□□□ 0.44
SHANK1-203ENST00000391813 KCNJ15Q99712 375 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms