RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 OR4K3Q96R72 315 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CCT7Q99832 543 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 KIFC1Q9BW19 673 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 UFSP2Q9NUQ7 469 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNHIT6Q9NWK9 470 aaKnown RBP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CLEC4AQ9UMR7 237 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 PPIAL4AQ9Y536 164 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CACNA1CQ13936 2221 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 IGHV2-70DA0A0C4DH43 119 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 TRBV11-1A0A0K0K1C0 115 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 LOC100131303A0A0U1RQF7 123 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 USP27XA6NNY8 438 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 ERI2A8K979 691 aaKnown RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 KLRC4-KLRK1H3BQV0 150 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 TXNDC9O14530 226 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 ALOX5P09917 674 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 PNMTP11086 282 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 PCMT1P22061 227 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 HSD17B2P37059 387 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPL29P47914 159 aaKnown RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 DSCR10P59022 87 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPS15AP62244 130 aaKnown RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 TBPL1P62380 186 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 MRPS11P82912 194 aaKnown RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 GSG1Q2KHT4 349 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 DEFB113Q30KQ7 82 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 TP53I3Q53FA7 332 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 PAMR1Q6UXH9 720 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 CCDC80Q76M96 950 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 LCA5Q86VQ0 697 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 CYP4Z2PQ8N1L4 340 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 TMEM251Q8N6I4 163 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 KIR3DL3Q8N743 410 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 EIF1ADQ8N9N8 165 aaKnown RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 MFSD9Q8NBP5 474 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR2M7Q8NG81 312 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 CD200R1Q8TD46 325 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 C1orf54Q8WWF1 131 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 NOL4LQ96MY1 436 aaPredicted RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 FOPNLQ96NB1 174 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 SECISBP2Q96T21 854 aaKnown RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 DEFB126Q9BYW3 111 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 TTTY12Q9BZ98 90 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 PROK2Q9HC23 129 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 ANKHQ9HCJ1 492 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 IL36GQ9NZH8 169 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 PDE10AQ9Y233 779 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 RASD1Q9Y272 281 aa4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 KLF13Q9Y2Y9 288 aaPredicted RBP4.17□□□□□ -1.74
RNU4-39P-201ENST00000362455 SNRNP200O75643 2136 aaKnown RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 LRP5LA4QPB2 252 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 BTNL10A8MVZ5 291 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 B4DXG7 233 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 TAPBPO15533 448 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF254O75437 659 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR2J2O76002 312 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 MYO1DO94832 1006 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 CATP04040 527 aaKnown RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 MPC1LP0DKB6 136 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 CCL3P10147 92 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 FDFT1P37268 417 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 DNASE1L1P49184 302 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 RAB8AP61006 207 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 RIPK1Q13546 671 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 GANABQ14697 944 aaKnown RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 EXOC3L2Q2M3D2 409 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC25A35Q3KQZ1 300 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 ANKRD22Q5VYY1 191 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF774Q6NX45 483 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 AGTRAPQ6RW13 159 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 TPRA1Q86W33 373 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 CPNE9Q8IYJ1 553 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 UBQLNLQ8IYU4 475 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 CA13Q8N1Q1 262 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 B3GNT7Q8NFL0 401 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 LINC01560Q8TB33 94 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 RMND5BQ96G75 393 aaPredicted RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC41A3Q96GZ6 507 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 VSIG2Q96IQ7 327 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 CAPZA3Q96KX2 299 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 GPR21Q99679 349 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 EBNA1BP2Q99848 306 aaKnown RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 MAGT1Q9H0U3 335 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 SH2D2AQ9NP31 389 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 FBXO6Q9NRD1 293 aaPredicted RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 ABCD2Q9UBJ2 740 aa4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF107Q9UII5 783 aaPredicted RBP4.16□□□□□ -1.74
RNU4-39P-201ENST00000362455 GTF3C1Q12789 2109 aa4.15□□□□□ -1.74
RNU4-39P-201ENST00000362455 CUBNO60494 3623 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 INTS1Q8N201 2190 aaKnown RBP4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 A0A0G2JN53 185 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 GOLGA6L19H0YKK7 550 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 WWP2O00308 870 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 BCKDKO14874 412 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 RS1O15537 224 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF208O43345 1280 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 OGNP20774 298 aaKnown RBP4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 CNR1P21554 472 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 SSR4P51571 173 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms