RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 OBP2BQ9NPH6 170 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 DAPK2Q9UIK4 370 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 PDCD5O14737 125 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 DHRS3O75911 302 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 INHBBP09529 407 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 SLC2A2P11168 524 aaPredicted RBP16.11■□□□□ 0.17
CLN3-206ENST00000360019 EPXP11678 715 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 WNT5AP41221 380 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 IDNKQ5T6J7 187 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 LINC00299Q6ZSB3 139 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 SERPINA12Q8IW75 414 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 OR51A2Q8NGJ7 313 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 AP3S1Q92572 193 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 CKLFQ9UBR5 152 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 SLC25A15Q9Y619 301 aa16.11■□□□□ 0.17
CLN3-206ENST00000360019 NGFP01138 241 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 ZNF12P17014 697 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 ATF1P18846 271 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 PRSS12P56730 875 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 ZNF92Q03936 586 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 TIMM23BQ5SRD1 257 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 CROCCP3Q8IVE0 287 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 ZNF101Q8IZC7 436 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 RGCCQ9H4X1 137 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 CRNNQ9UBG3 495 aaPredicted RBP16.1■□□□□ 0.17
CLN3-206ENST00000360019 AMDHD2Q9Y303 409 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 V9GY05 133 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 LOC390937A0A1W2PQ73 354 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 CCL21O00585 134 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 ZNF20P17024 532 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 CFL1P23528 166 aaKnown RBP16.1■□□□□ 0.17
CLN3-206ENST00000360019 CCKARP32238 428 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 GNALP38405 381 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 DDOSTP39656 456 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 PEX19P40855 299 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 TNK1Q13470 666 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 MOGQ16653 247 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 TBC1D28Q2M2D7 210 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 SPSB4Q96A44 273 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 APOBEC3DQ96AK3 386 aaPredicted RBP16.1■□□□□ 0.17
CLN3-206ENST00000360019 PLEKHA1Q9HB21 404 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 ZNF391Q9UJN7 358 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 PEX16Q9Y5Y5 336 aa16.1■□□□□ 0.17
CLN3-206ENST00000360019 hCG_38984A0A1B0GV85 526 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 IFITM5A6NNB3 132 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 XRCC2O43543 280 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 IGLV1-44P01699 117 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 ACKR3P25106 362 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 ZNF529Q6P280 563 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 ACTR6Q9GZN1 396 aa16.09■□□□□ 0.17
CLN3-206ENST00000360019 ANXA2P2A6NMY6 339 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 AIPO00170 330 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 RGS5O15539 181 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 MTRF1O75570 445 aaKnown RBP16.08■□□□□ 0.17
CLN3-206ENST00000360019 FAHP16930 419 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 FAM3AP98173 230 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 SPOCK1Q08629 439 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 RFPL4BQ6ZWI9 263 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 LAX1Q8IWV1 398 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 CCDC54Q8NEL0 328 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 OR5D14Q8NGL3 314 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 OR13C9Q8NGT0 318 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 MIXL1Q9H2W2 232 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 POFUT1Q9H488 388 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 AKIP1Q9NQ31 210 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 ELOVL5Q9NYP7 299 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 COMMD3Q9UBI1 195 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 PIGLQ9Y2B2 252 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 STARD10Q9Y365 291 aa16.08■□□□□ 0.17
CLN3-206ENST00000360019 A0A0B4J203 849 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 PAHP00439 452 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 BMP4P12644 408 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 PPP3R1P63098 170 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 GK2Q14410 553 aaPredicted RBP16.08■□□□□ 0.16
CLN3-206ENST00000360019 TAB1Q15750 504 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 HES5Q5TA89 166 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 C22orf34Q6ZV56 151 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 STEAP2Q8NFT2 490 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 SEMA6DQ8NFY4 1073 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 OR1M1Q8NGA1 313 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 KCTD12Q96CX2 325 aaKnown RBP16.08■□□□□ 0.16
CLN3-206ENST00000360019 ABCB9Q9NP78 766 aa16.08■□□□□ 0.16
CLN3-206ENST00000360019 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 DHRS7CA6NNS2 312 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 ATXN7O15265 892 aaPredicted RBP16.07■□□□□ 0.16
CLN3-206ENST00000360019 ICMTO60725 284 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 CECR9P0C854 216 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 S100A5P33763 92 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 GSK3AP49840 483 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 OR8B8Q15620 311 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 FJX1Q86VR8 437 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 MFSD4AQ8N468 514 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 FAM169BQ8N8A8 192 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 ACOT12Q8WYK0 555 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 AKAP1Q92667 903 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLN3-206ENST00000360019 NKX3-1Q99801 234 aaPredicted RBP16.07■□□□□ 0.16
CLN3-206ENST00000360019 OR51B6Q9H340 312 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 TBCCD1Q9NVR7 557 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 CMAHPQ9Y471 501 aa16.07■□□□□ 0.16
CLN3-206ENST00000360019 SMPD2O60906 423 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms