RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 IGHV2-70DA0A0C4DH43 119 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 IGHV3-64DA0A0J9YX35 117 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 DHRS12A0PJE2 317 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 PHYHO14832 338 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 XRCC2O43543 280 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 FAM20BO75063 409 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 CST1P01037 141 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 APOC1P02654 83 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 CLUP10909 449 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 CFPP27918 469 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 GRK5P34947 590 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 PSMB10P40306 273 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 PRKXP51817 358 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 MZT1Q08AG7 82 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 MPPED2Q15777 294 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 C9orf139Q6ZV77 190 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 OR6K6Q8NGW6 343 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 OR2AE1Q8NHA4 323 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 TRIM36Q9NQ86 728 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 RNF7Q9UBF6 113 aa14.82□□□□□ -0.04
HDDC3-201ENST00000330334 C5orf63A6NC05 138 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 NDUFA2O43678 99 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 PITPNBP48739 271 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 NPY4RP50391 375 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 UBA52P62987 128 aaKnown RBP14.81□□□□□ -0.04
HDDC3-201ENST00000330334 FAM201AQ5SY85 155 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 ZNF841Q6ZN19 808 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 SHFQ7M4L6 423 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 RNF133Q8WVZ7 376 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 C22orf15Q8WYQ4 148 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 UPRTQ96BW1 309 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 CCDC124Q96CT7 223 aaKnown RBP14.81□□□□□ -0.04
HDDC3-201ENST00000330334 CLPTM1LQ96KA5 538 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 THTPAQ9BU02 230 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 ADAT1Q9BUB4 502 aaKnown RBP14.81□□□□□ -0.04
HDDC3-201ENST00000330334 ZMAT3Q9HA38 289 aaKnown RBP14.81□□□□□ -0.04
HDDC3-201ENST00000330334 CLN8Q9UBY8 286 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 ZNF69Q9UC07 566 aa14.81□□□□□ -0.04
HDDC3-201ENST00000330334 H3BN98 237 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 TNFRSF13BO14836 293 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-201ENST00000330334 GLCEO94923 617 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 ANOS1P23352 680 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 CFL1P23528 166 aaKnown RBP14.8□□□□□ -0.04
HDDC3-201ENST00000330334 GSTT1P30711 240 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 PRAMEF6Q5VXH4 476 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 WDR25Q64LD2 544 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-201ENST00000330334 PRSS45Q7RTY3 260 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 DPY19L4Q7Z388 723 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 TIGD4Q8IY51 512 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 OR52H1Q8NGJ2 320 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 CANT1Q8WVQ1 401 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 INTS14Q96SY0 518 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 ABHD6Q9BV23 337 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 UFSP2Q9NUQ7 469 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 C14orf119Q9NWQ9 140 aa14.8□□□□□ -0.04
HDDC3-201ENST00000330334 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.79□□□□□ -0.04
HDDC3-201ENST00000330334 CLDN34H7C241 214 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 LGALS8O00214 317 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 HMGN1P05114 100 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 PAICSP22234 425 aaKnown RBP14.79□□□□□ -0.04
HDDC3-201ENST00000330334 PRTN3P24158 256 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 BPIFB3P59826 476 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 EIF2B1Q14232 305 aaKnown RBP14.79□□□□□ -0.04
HDDC3-201ENST00000330334 C11orf91Q3C1V1 193 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 OR56B2PQ8NGI1 322 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 SGK3Q96BR1 496 aa14.79□□□□□ -0.04
HDDC3-201ENST00000330334 DOCK11Q5JSL3 2073 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 TRAV38-1A0A0B4J264 116 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 FAM183AA6NL82 134 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 ANKRD30BLA7E2S9 258 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 DYNC1I1O14576 645 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 GNGT2O14610 69 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 PLATP00750 562 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 LHBP01229 141 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 LIPFP07098 398 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 SLC2A1P11166 492 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 HSD11B1P28845 292 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 OPRL1P41146 370 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 MTNR1AP48039 350 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 CX3CR1P49238 355 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 FAM3AP98173 230 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 DNAL1Q4LDG9 190 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 CD276Q5ZPR3 534 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 LYPD2Q6UXB3 125 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 SLC16A9Q7RTY1 509 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 TMEM179BQ7Z7N9 219 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 ERI1Q8IV48 349 aaKnown RBP14.78□□□□□ -0.04
HDDC3-201ENST00000330334 PARP8Q8N3A8 854 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 IQCF1Q8N6M8 205 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 C3orf56Q8N813 242 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 ZNF454Q8N9F8 522 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 ZMYND19Q96E35 227 aaPredicted RBP14.78□□□□□ -0.04
HDDC3-201ENST00000330334 NUDT16L1Q9BRJ7 211 aaKnown RBP14.78□□□□□ -0.04
HDDC3-201ENST00000330334 MS4A7Q9GZW8 240 aaPredicted RBP14.78□□□□□ -0.04
HDDC3-201ENST00000330334 RGCCQ9H4X1 137 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 YY1AP1Q9H869 796 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 MED20Q9H944 212 aa14.78□□□□□ -0.04
HDDC3-201ENST00000330334 PDP1Q9P0J1 537 aaPredicted RBP14.78□□□□□ -0.04
HDDC3-201ENST00000330334 ERVK-18Q9QC07 812 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms