RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ZNF629Q9UEG4 869 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SRP14P37108 136 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF154Q13106 437 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 PMCHL1Q16048 86 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 TMEM185AQ8NFB2 350 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 IGSF8Q969P0 613 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FOXD3Q9UJU5 478 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 MRPS16Q9Y3D3 137 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 TCRBV16S1A1N1A0A5B0 115 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ERGP11308 486 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 HTR4Q13639 388 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 HERPUD1Q15011 391 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 RNF151Q2KHN1 245 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 NLGN4XQ8N0W4 816 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 MS4A6EQ96DS6 147 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 AKIP1Q9NQ31 210 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 KCNS2Q9ULS6 477 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FAM90A9PA6NNJ1 464 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 DAOP14920 347 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 POU3F2P20265 443 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 UBE2KP61086 200 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FAM3AP98173 230 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 GABRA6Q16445 453 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 TMEM81Q6P7N7 255 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SPEM1Q8N4L4 309 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 UBAC2Q8NBM4 344 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FAM3CQ92520 227 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OPALINQ96PE5 141 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF385DQ9H6B1 395 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 TICRRQ7Z2Z1 1910 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF195O14628 629 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CD8BP10966 210 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 GDF5P43026 501 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 BSXQ3C1V8 233 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 IGSF11Q5DX21 431 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 Q6ZSR6 202 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 RBM24Q9BX46 236 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 FTSJ1Q9UET6 329 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 MPLP40238 635 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SELENOTP62341 195 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CCDC144NLQ6NUI1 221 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 VTCN1Q7Z7D3 282 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR1L4Q8NGR5 311 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR52N5Q8NH56 324 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 POFUT1Q9H488 388 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CD84Q9UIB8 345 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 BCAT2O15382 392 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 RPL13AP40429 203 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 C1orf140Q5VVS0 124 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 RPS4Y2Q8TD47 263 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 PIGTQ969N2 578 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 GGACTQ9BVM4 153 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 POU2F3Q9UKI9 436 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SAP18O00422 153 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 IGFBP1P08833 259 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SULT1A3P0DMM9 295 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SULT1A4P0DMN0 295 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 POU3F1Q03052 451 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SMAD4Q13485 552 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SHBQ15464 509 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 C12orf54Q6X4T0 127 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 THNSL2Q86YJ6 484 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 LRRC18Q8N456 261 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR1N1Q8NGS0 311 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FGF13Q92913 245 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR51I2Q9H344 312 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 RASL12Q9NYN1 266 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 A0A0B4J203 849 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 NDUFB6O95139 128 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FSTP19883 344 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FUT3P21217 361 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 BSGP35613 385 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SUCLG1P53597 346 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 FCRLAQ7L513 359 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 N6AMT1Q9Y5N5 214 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 WNT6Q9Y6F9 365 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 B4GAT1O43505 415 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 BUD23O43709 281 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SUSD5O60279 629 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR2J2O76002 312 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF534Q76KX8 674 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CALHM2Q9HA72 323 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 NOSIPQ9Y314 301 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 ANKUB1A6NFN9 424 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 K7ERQ8 282 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 MFNGO00587 321 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 FDX2Q6P4F2 183 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SIGLECL1Q8N7X8 197 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR2AK2Q8NG84 335 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 Q96M85 177 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 TUBA4BQ9H853 241 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SPTBN1Q01082 2364 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF732B4DXR9 585 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 RAB27BO00194 218 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 HMGN4O00479 90 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CH25HO95992 272 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 LCN2P80188 198 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 IL24Q13007 206 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms