RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FAM71CQ8NEG0 241 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 ZNF799Q96GE5 643 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 FAHD2AQ96GK7 314 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 HSD17B10Q99714 261 aaKnown RBP10.99□□□□□ -0.65
PCF11-201ENST00000298281 PSORS1C1Q9UIG5 152 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 TRGV10A0A0A0MS01 117 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 TNFRSF10CO14798 259 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 HSBP1O75506 76 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 OR1D5P58170 312 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 DEFB103AP81534 67 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 OR1L1Q8NH94 360 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 EGLN2Q96KS0 407 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 ACOD1A6NK06 481 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 TSPAN12O95859 305 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 LGALS14Q8TCE9 139 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 NALCNQ8IZF0 1738 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 NOVP48745 357 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 PRDX4Q13162 271 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 ATP6V1FQ16864 119 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 BCL7AQ4VC05 210 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 OR5M9Q8NGP3 310 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 TNFRSF13CQ96RJ3 184 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 SEBOXQ9HB31 216 aaPredicted RBP10.99□□□□□ -0.65
PCF11-201ENST00000298281 GPR173Q9NS66 373 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 STRAPQ9Y3F4 350 aaKnown RBP10.99□□□□□ -0.65
PCF11-201ENST00000298281 A0A1B0GX78 115 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 GLI4P10075 376 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 APOBEC1P41238 236 aaKnown RBP10.99□□□□□ -0.65
PCF11-201ENST00000298281 SEZ6L2Q6UXD5 910 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 SEH1LQ96EE3 360 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 PIGMQ9H3S5 423 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 A0A1B0GWA3 101 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 SPINK4O60575 86 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 FAM87AP0C7U9 286 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 TM4SF4P48230 202 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 PTCRAQ6ISU1 281 aaPredicted RBP10.99□□□□□ -0.65
PCF11-201ENST00000298281 H1FNTQ75WM6 255 aaPredicted RBP10.99□□□□□ -0.65
PCF11-201ENST00000298281 COMMD1Q8N668 190 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 MOGAT1Q96PD6 335 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 ACSM4P0C7M7 580 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 SLC6A11P48066 632 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 MOGAT2Q3SYC2 334 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 JAM3Q9BX67 310 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 EMCNQ9ULC0 261 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 IGHV3OR16-12A0A075B7B8 117 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 NDUFB3O43676 98 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 ARNTP27540 789 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 PCBP3P57721 371 aaKnown RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 SSX1Q16384 188 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 OR2G6Q5TZ20 316 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 RPEQ96AT9 228 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 PRSS16Q9NQE7 514 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 TRDV1A0A1B0GX56 115 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 RRASP10301 218 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 FABP4P15090 132 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 HTR1DP28221 377 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 ELAVL1Q15717 326 aaKnown RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 SLC48A1Q6P1K1 146 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 OR2Z1Q8NG97 314 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 OR51F2Q8NH61 342 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 NMNAT3Q96T66 252 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 PCOLCE2Q9UKZ9 415 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 GPR55Q9Y2T6 319 aaPredicted RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 OR4C46A6NHA9 309 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 NRG2O14511 850 aaPredicted RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 TNFSF11O14788 317 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 HPP00738 406 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 IL5P05113 134 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 GUSBP08236 651 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 FOXK2Q01167 660 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 GLYATL3Q5SZD4 288 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 ANGPTL5Q86XS5 388 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 GALMQ96C23 342 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 TXNIPQ9H3M7 391 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 FZR1Q9UM11 496 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 A0A0B4J293 547 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 FAM157AC9JC47 383 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 M0QYG6 137 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 RPL24P83731 157 aaKnown RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 SMAGPQ0VAQ4 97 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 LINC00299Q6ZSB3 139 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 TMED6Q8WW62 240 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 GSX1Q9H4S2 264 aaPredicted RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 CTSFQ9UBX1 484 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 SLCO2B1O94956 709 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 PAPLNO95428 1278 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 RAF1P04049 648 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 SRMP19623 302 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 POU3F3P20264 500 aaPredicted RBP10.98□□□□□ -0.65
PCF11-201ENST00000298281 HFEQ30201 348 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 FBXO27Q8NI29 283 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 TMEM18Q96B42 140 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 FAM3DQ96BQ1 224 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
PCF11-201ENST00000298281 KCNAB3O43448 404 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 TNFSF15O95150 251 aa10.97□□□□□ -0.65
PCF11-201ENST00000298281 ALDOCP09972 364 aaKnown RBP10.97□□□□□ -0.65
PCF11-201ENST00000298281 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms