RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ZNF69Q9UC07 566 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF107Q9UII5 783 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 HSPB11Q9Y547 144 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 STMND1H3BQB6 276 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 PYCARD-AS1I3L0S3 204 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 NEURL1O76050 574 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 RAB3DO95716 219 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 CPN1P15169 458 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 OR2W3Q7Z3T1 314 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 NAA40Q86UY6 237 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF101Q8IZC7 436 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 OR2M7Q8NG81 312 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 OR14K1Q8NGZ2 314 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 CPT1CQ8TCG5 803 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 ADAMTS17Q8TE56 1095 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF431Q8TF32 576 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 AQP3Q92482 292 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 DVL3Q92997 716 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 FBXO17Q96EF6 278 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 SIGLEC12Q96PQ1 595 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 ZMAT3Q9HA38 289 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 CRLF2Q9HC73 371 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 SCP2D1Q9UJQ7 156 aa11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 MRPS28Q9Y2Q9 187 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM235A6NFC5 223 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 M0R135 149 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 RAB27BO00194 218 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 IGLV3-1P01715 115 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 RLN1P04808 185 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 FCER2P06734 321 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CST2P09228 141 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ANOS1P23352 680 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 OTX1P32242 354 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 GSK3AP49840 483 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZP1P60852 638 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 AIMP2Q13155 320 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 RAB35Q15286 201 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF260Q3ZCT1 412 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF626Q68DY1 528 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 LAMTOR1Q6IAA8 161 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 GLIPR1L1Q6UWM5 242 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CHMP1BQ7LBR1 199 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF584Q8IVC4 421 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 SPICQ8N5J4 248 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CHST4Q8NCG5 386 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CCDC54Q8NEL0 328 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF799Q96GE5 643 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 LYZL4Q96KX0 146 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 SPACA5Q96QH8 159 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 DLL4Q9NR61 685 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM38BQ9NVV0 291 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 UPB1Q9UBR1 384 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 MGAT4AQ9UM21 535 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 NPTNQ9Y639 398 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 MUC3AQ02505 3323 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF736B4DX44 427 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 E9PLN8 166 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 AKR7A2O43488 359 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 SGCEO43556 437 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CYTIPO60759 359 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 MTRF1O75570 445 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 DHRS3O75911 302 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 THBS4P35443 961 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CLDN15P56746 228 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ECH1Q13011 328 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 OR1C1Q15619 314 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 CDNFQ49AH0 187 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 SEZ6L2Q6UXD5 910 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 C9orf62Q8N4C0 152 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 GPER1Q99527 375 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF703Q9H7S9 590 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 MGAT4CQ9UBM8 478 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 V9GYS6 101 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 WDFY3Q8IZQ1 3526 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 NCOR1O75376 2440 aa11.36□□□□□ -0.59
SPTLC1-201ENST00000262554 WDFY4Q6ZS81 3184 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 UBE2QL1A1L167 161 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF780AO75290 641 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 HPNP05981 417 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 CHRM2P08172 466 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 UBBP0CG47 229 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 NTF4P34130 210 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 SNRPD2P62316 118 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 SCRN3Q0VDG4 424 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 FAM189A2Q15884 450 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 HYAL4Q2M3T9 481 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 RSPO1Q2MKA7 263 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 RIPPLY2Q5TAB7 128 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 SLC36A1Q7Z2H8 476 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 PNLDC1Q8NA58 520 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 OR52H1Q8NGJ2 320 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 OR10R2Q8NGX6 335 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 KCNG3Q8TAE7 436 aa11.35□□□□□ -0.59
SPTLC1-201ENST00000262554 FER1L6-AS2Q96M78 137 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms