RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ZNF823P16415 610 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 MEP1BQ16820 701 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 CLEC12AQ5QGZ9 265 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 CORO6Q6QEF8 472 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 FANK1Q8TC84 345 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 SSMEM1Q8WWF3 244 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 FUZQ9BT04 418 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 OR52D1Q9H346 318 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 SPAG4Q9NPE6 437 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 MED4Q9NPJ6 270 aa14.82□□□□□ -0.04
SHKBP1-227ENST00000602011 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 CLPSL1A2RUU4 121 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 CD300LBA8K4G0 201 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 M0R135 149 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 TIMM23O14925 209 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 FAM20BO75063 409 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 TOX4O94842 621 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 GADD45GO95257 159 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 HLA-DQA2P01906 255 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 HIST1H1CP16403 213 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 OMGP23515 440 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 GGT2P36268 569 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 DDOSTP39656 456 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 NUDT2P50583 147 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 RAG2P55895 527 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 PSME3P61289 254 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 SRSF4Q08170 494 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 SEC23BQ15437 767 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 METTL11BQ5VVY1 283 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 OTPQ5XKR4 325 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 OLFML2AQ68BL7 652 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 RPL13AP3Q6NVV1 102 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 DRAM2Q6UX65 266 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 LYPD2Q6UXB3 125 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 ZNF620Q6ZNG0 422 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 OR52J3Q8NH60 311 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 DYRK2Q92630 601 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 MCUR1Q96AQ8 359 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 ZNF799Q96GE5 643 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 PYURFQ96I23 114 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 IFT27Q9BW83 186 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 WDR76Q9H967 626 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 RPRD1BQ9NQG5 326 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 GMPR2Q9P2T1 348 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 TMCC3Q9ULS5 477 aa14.81□□□□□ -0.04
SHKBP1-227ENST00000602011 NCK1P16333 377 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 CFHR2P36980 270 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 SF3A3Q12874 501 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 FAM201AQ5SY85 155 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 BRD3OSQ6XYD6 125 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 LINC00471Q8N535 108 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 OR4K13Q8NH42 304 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 WDFY2Q96P53 400 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 TECTBQ96PL2 329 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 PCGF1Q9BSM1 259 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 PNRC2Q9NPJ4 139 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 ACOXLQ9NUZ1 547 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 C14orf119Q9NWQ9 140 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 CD300AQ9UGN4 299 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 NOTCH1P46531 2555 aa14.8□□□□□ -0.04
SHKBP1-227ENST00000602011 OOEPA6NGQ2 149 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 GGT3PA6NGU5 568 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 C22orf46C9J442 243 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 M0QZ24 198 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 OR10H3O60404 316 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 CA6P23280 308 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 PRDX6P30041 224 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 OTX1P32242 354 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 GRK5P34947 590 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 MPPED2Q15777 294 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 FIP1L1Q6UN15 594 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 LINC00346Q8IVM7 164 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 OR2T4Q8NH00 348 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 GNPDA2Q8TDQ7 276 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 NPRL2Q8WTW4 380 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 WFDC12Q8WWY7 111 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 NSRP1Q9H0G5 558 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 MMADHCQ9H3L0 296 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 SP140LQ9H930 580 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 UFSP2Q9NUQ7 469 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 C1RLQ9NZP8 487 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 KAAG1Q9UBP8 84 aa14.79□□□□□ -0.04
SHKBP1-227ENST00000602011 IGHV3-64DA0A0J9YX35 117 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 CENPVL3A0A0U1RRI6 287 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 MDFIC2A0A1B0GVS7 189 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 OR6C68A6NDL8 312 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 GPR37O15354 613 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 ADAM20O43506 726 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 KRT36O76013 467 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 MELTFP08582 738 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 MMP9P14780 707 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 GSSP48637 474 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 TSPAN31Q12999 210 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 OR8B8Q15620 311 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 NAA40Q86UY6 237 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 KIR3DL3Q8N743 410 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 LRTOMTQ8WZ04 291 aa14.78□□□□□ -0.04
SHKBP1-227ENST00000602011 CITED1Q99966 193 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms