RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PLBD1Q6P4A8 553 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 RFPL4BQ6ZWI9 263 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 SHFQ7M4L6 423 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 ZNF511Q8NB15 262 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 ZNRF4Q8WWF5 429 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 DVL3Q92997 716 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 SPTSSAQ969W0 71 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 APOBEC3DQ96AK3 386 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 RBM4BQ9BQ04 359 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 OAZ3Q9UMX2 235 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 COMMD3-BMI1R4GMX3 469 aa14.81□□□□□ -0.04
SHKBP1-203ENST00000594298 FOXH1O75593 365 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 CLUP10909 449 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 TPTEP56180 551 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 LCN2P80188 198 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 TAF13Q15543 124 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 PCK2Q16822 640 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 SLC35D3Q5M8T2 416 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 LINC01590Q5TEZ4 76 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 CPOQ8IVL8 374 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 ST7LQ8TDW4 575 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 SLC7A6Q92536 515 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 INTS14Q96SY0 518 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 PKP2Q99959 881 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 MED20Q9H944 212 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 WDR76Q9H967 626 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 DDX28Q9NUL7 540 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 POLR3KQ9Y2Y1 108 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 STARD10Q9Y365 291 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 ORC6Q9Y5N6 252 aa14.8□□□□□ -0.04
SHKBP1-203ENST00000594298 ISPDA4D126 451 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 SAC3D1A6NKF1 404 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 F5H5K5 113 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 MITFO75030 526 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 DYSFO75923 2080 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 DBHP09172 617 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 RPS7P62081 194 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 KLHL12Q53G59 568 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 PRR31Q5SQ13 230 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 DCXRQ7Z4W1 244 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 ERI1Q8IV48 349 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 MAP6Q96JE9 813 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 ZNF747Q9BV97 191 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 HCAR1Q9BXC0 346 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 MARCH7Q9H992 704 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 S100A14Q9HCY8 104 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 H2AFY2Q9P0M6 372 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 NPTNQ9Y639 398 aa14.79□□□□□ -0.04
SHKBP1-203ENST00000594298 H3BNX3 289 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 TIMM8AO60220 97 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 IGHV2-70P01814 119 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 HKR1P10072 659 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 ZFP36P26651 326 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 SLC15A1P46059 708 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 FOXL1Q12952 345 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 CDK5R2Q13319 367 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 KRTAP27-1Q3LI81 207 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 LCN1P1Q5VSP4 162 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 SLX4IPQ5VYV7 408 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 DEFB108BQ8NET1 73 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 OR6N2Q8NGY6 317 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 STMN2Q93045 179 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 CMBLQ96DG6 245 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 SLAMF6Q96DU3 332 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 PNRC2Q9NPJ4 139 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 CENPMQ9NSP4 180 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 PURGQ9UJV8 347 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-203ENST00000594298 ZAR1LA6NP61 321 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 APOC1P02654 83 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 LCATP04180 440 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 ACSM4P0C7M7 580 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 RAC2P15153 192 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 RPS27P42677 84 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 GRB2P62993 217 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 TNFAIP6P98066 277 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 MALLQ13021 153 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 PSG7Q13046 419 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 EIF2B1Q14232 305 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 TMEM155Q4W5P6 130 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 SPRNQ5BIV9 151 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 LYPD4Q6UWN0 246 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 RBMS3Q6XE24 437 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 RHOUQ7L0Q8 258 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF771Q7L3S4 317 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 DOK3Q7L591 496 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 DPY19L4Q7Z388 723 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 SPICQ8N5J4 248 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF454Q8N9F8 522 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 C22orf15Q8WYQ4 148 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 HAVCR1Q96D42 359 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 CIB1Q99828 191 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 COPS4Q9BT78 406 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 C1QTNF5Q9BXJ0 243 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 TOR3AQ9H497 397 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 SP140LQ9H930 580 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 MSL2Q9HCI7 577 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 TMEM106BQ9NUM4 274 aa14.77□□□□□ -0.05
SHKBP1-203ENST00000594298 ZNF878C9JN71 531 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms