RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PHYHO14832 338 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 CLPTM1O96005 669 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ALOX5APP20292 161 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ETV1P50549 477 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ERVS71-1P61550 626 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ZNF85Q03923 595 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 KRTAP1-1Q07627 177 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ENDOGQ14249 297 aaKnown RBP12.4□□□□□ -0.42
COMMD4-225ENST00000569245 KCTD8Q6ZWB6 473 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 DPY19L4Q7Z388 723 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 SYT9Q86SS6 491 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 NANOGP1Q8N7R0 232 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 OR6N2Q8NGY6 317 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 OTOSQ8NHW6 89 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 SNX33Q8WV41 574 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ACOT13Q9NPJ3 140 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 SLCO1C1Q9NYB5 712 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 CLEC2DQ9UHP7 191 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 COPS3Q9UNS2 423 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
COMMD4-225ENST00000569245 A0A096LNT2 108 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 A0A1W2PQL4 384 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF670-ZNF695F2Z2N8 137 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 LYNX1G3V0Z9 82 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 LYNX1P0DP58 116 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 PSKH1P11801 424 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF250P15622 560 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 JUNBP17275 347 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-225ENST00000569245 GCH1P30793 250 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 MAP2K4P45985 399 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 HCCSP53701 268 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 SCRN3Q0VDG4 424 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 GALEQ14376 348 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 MOGQ16653 247 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 MEP1BQ16820 701 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 SPATA46Q5T0L3 261 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 OTPQ5XKR4 325 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 XAF1Q6GPH4 301 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 ARL9Q6T311 187 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-225ENST00000569245 LHFPL3Q86UP9 236 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 OR52N1Q8NH53 320 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 ABHD4Q8TB40 342 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 WACQ9BTA9 647 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
COMMD4-225ENST00000569245 LSM2Q9Y333 95 aaKnown RBP12.39□□□□□ -0.43
COMMD4-225ENST00000569245 ARFGEF3Q5TH69 2177 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 VWC2LB2RUY7 222 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 MYL12BO14950 172 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 MT-ND5P03915 603 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 TFAP2AP05549 437 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 SPARCP09486 303 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 WNT5AP41221 380 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 HTR5AP47898 357 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 EGR3Q06889 387 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 BLMHQ13867 455 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF718Q3SXZ3 478 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 UBE2UQ5VVX9 321 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 CYB5R2Q6BCY4 276 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 SLC18B1Q6NT16 456 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF101Q8IZC7 436 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 KLHL36Q8N4N3 616 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF485Q8NCK3 441 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 MRPL48Q96GC5 212 aaKnown RBP12.38□□□□□ -0.43
COMMD4-225ENST00000569245 C4orf45Q96LM5 186 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 TBX5Q99593 518 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 ALG8Q9BVK2 526 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 CDADC1Q9BWV3 514 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 CAB39Q9Y376 341 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-225ENST00000569245 LHFPL6Q9Y693 200 aa12.38□□□□□ -0.43
COMMD4-225ENST00000569245 FN1P02751 2386 aaKnown RBP12.38□□□□□ -0.43
COMMD4-225ENST00000569245 NAV3Q8IVL0 2385 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 IGHV4-61A0A0C4DH41 118 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 A8MV72 311 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-225ENST00000569245 TPD52L2O43399 206 aaKnown RBP12.37□□□□□ -0.43
COMMD4-225ENST00000569245 SGCEO43556 437 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 DOK2O60496 412 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 ABHD16AO95870 558 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 RPS27P42677 84 aaKnown RBP12.37□□□□□ -0.43
COMMD4-225ENST00000569245 RPL5P46777 297 aaKnown RBP12.37□□□□□ -0.43
COMMD4-225ENST00000569245 ALDH3B2P48448 385 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 WNT4P56705 351 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 ACTA2P62736 377 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 ACTG2P63267 376 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 AQP6Q13520 282 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 EIF2B1Q14232 305 aaKnown RBP12.37□□□□□ -0.43
COMMD4-225ENST00000569245 CDONQ4KMG0 1287 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF684Q5T5D7 378 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-225ENST00000569245 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
COMMD4-225ENST00000569245 SSX6Q7RTT6 188 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms