RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TRAPPC6AO75865 159 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 PTAFRP25105 342 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 OPRM1P35372 400 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 DCAF7P61962 342 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 HNF4GQ14541 408 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 ELAVL1Q15717 326 aaKnown RBP9.46□□□□□ -0.89
USB1-212ENST00000566082 SGCBQ16585 318 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 PRSS35Q8N3Z0 413 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 GPX8Q8TED1 209 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 C2orf50Q96LR7 162 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 GDF15Q99988 308 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 ZNF2Q9BSG1 426 aaPredicted RBP9.46□□□□□ -0.89
USB1-212ENST00000566082 S1PR5Q9H228 398 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 FBRSQ9HAH7 460 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 ZNF275Q9NSD4 429 aaPredicted RBP9.46□□□□□ -0.89
USB1-212ENST00000566082 SUSD2Q9UGT4 822 aa9.46□□□□□ -0.89
USB1-212ENST00000566082 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.89
USB1-212ENST00000566082 RP1L1Q8IWN7 2480 aaPredicted RBP9.46□□□□□ -0.89
USB1-212ENST00000566082 HPP00738 406 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 CD37P11049 281 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 DAOP14920 347 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 ABOP16442 354 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 TAGLN2P37802 199 aaKnown RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 GABREP78334 506 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 TMEM176BQ3YBM2 270 aaPredicted RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 TMEM182Q6ZP80 229 aaPredicted RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 H1FNTQ75WM6 255 aaPredicted RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 ZNF561Q8N587 486 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 CCDC71LQ8N9Z2 235 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 OR52N4Q8NGI2 321 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 OR5L1Q8NGL2 311 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 GLYATL2Q8WU03 294 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 KIRREL1Q96J84 757 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 CCNL2Q96S94 520 aaPredicted RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 TGIF2Q9GZN2 237 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 AICDAQ9GZX7 198 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 SLC17A5Q9NRA2 495 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 GDF2Q9UK05 429 aaPredicted RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 TNFSF18Q9UNG2 199 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 ZNF705GA8MUZ8 300 aaPredicted RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 NXPH3O95157 252 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 OR2C1O95371 312 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 DUS4LO95620 317 aaKnown RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 CRHP06850 196 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 SCAND1P57086 179 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 HSF1Q00613 529 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 RPL7L1Q6DKI1 246 aaKnown RBP9.46□□□□□ -0.9
USB1-212ENST00000566082 DGAT2L6Q6ZPD8 337 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 CDC20BQ86Y33 519 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 BATF2Q8N1L9 274 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 FAM24BQ8N5W8 94 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 ZDHHC22Q8N966 263 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 HAS2Q92819 552 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 AMELYQ99218 206 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 NELFAQ9H3P2 528 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 CNTD2Q9H8S5 307 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 SLC5A6Q9Y289 635 aa9.46□□□□□ -0.9
USB1-212ENST00000566082 LOC285556D6RIA3 1793 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 HSPB2A8KAH6 182 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 PHF1O43189 567 aaPredicted RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 PLRG1O43660 514 aaKnown RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 OR7C1O76099 320 aaPredicted RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 IGKV1D-16P01601 117 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 DBHP09172 617 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 ZNF728P0DKX0 622 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 HSPB2Q16082 182 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 CLEC1AQ8NC01 280 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 ZNRF4Q8WWF5 429 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 ANKRD9Q96BM1 317 aaPredicted RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 RSRP1Q9BUV0 290 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 PBX4Q9BYU1 374 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 PBOV1Q9GZY1 135 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 GFOD1Q9NXC2 390 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 DKKL1Q9UK85 242 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 FLVCR1Q9Y5Y0 555 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 FAM221AA4D161 298 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 DUX1O43812 170 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 TXNDC12O95881 172 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 CSNK1A1P48729 337 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 HOXA1P49639 335 aaPredicted RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 IL34Q6ZMJ4 242 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 BEND4Q6ZU67 534 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 FBXO17Q96EF6 278 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 LAT2Q9GZY6 243 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 PTPRDP23468 1912 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 A0A087WV48 116 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 OR2M5A3KFT3 312 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 BLACEA4D250 179 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 FAM221BA6H8Z2 402 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 OR6C76A6NM76 312 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 A8MXK9 166 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 CYR61O00622 381 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 TNFRSF10CO14798 259 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 TAAR5O14804 337 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 GLRA1P23415 457 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 RFC3P40938 356 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 RPS18P62269 152 aaKnown RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 TOMM34Q15785 309 aaPredicted RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 ZNF141Q15928 474 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms