RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
SPG7-209ENST00000564047 POM121L2Q96KW2 1035 aa11.21□□□□□ -0.61
SPG7-209ENST00000564047 OPALINQ96PE5 141 aa11.21□□□□□ -0.61
SPG7-209ENST00000564047 ST6GALNAC2Q9UJ37 374 aa11.21□□□□□ -0.61
SPG7-209ENST00000564047 GRIP1Q9Y3R0 1128 aa11.21□□□□□ -0.61
SPG7-209ENST00000564047 DCHS2Q6V1P9 2916 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
SPG7-209ENST00000564047 LOC100509620A0A075B734 347 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 TMEM269A0A1B0GVZ9 245 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 F5H5K5 113 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 LOC110117498-PIK3R3F6TDL0 507 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 J3QRK9 145 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 M0R135 149 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 PNPP00491 289 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 CD1AP06126 327 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 DBHP09172 617 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 ACSM4P0C7M7 580 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 CPEP16870 476 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 CD40LGP29965 261 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 CX3CR1P49238 355 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 GDI2P50395 445 aaKnown RBP11.2□□□□□ -0.62
SPG7-209ENST00000564047 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
SPG7-209ENST00000564047 CCR9P51686 369 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 GALK2Q01415 458 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 GPR50Q13585 617 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 TPBGQ13641 420 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 ALKBH1Q13686 389 aaKnown RBP11.2□□□□□ -0.62
SPG7-209ENST00000564047 CDK5R1Q15078 307 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 TSTQ16762 297 aaKnown RBP11.2□□□□□ -0.62
SPG7-209ENST00000564047 TBC1D28Q2M2D7 210 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 DMKNQ6E0U4 476 aaPredicted RBP11.2□□□□□ -0.62
SPG7-209ENST00000564047 ZNF283Q8N7M2 679 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 SLC30A7Q8NEW0 376 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 OR1J2Q8NGS2 313 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 OR2G2Q8NGZ5 317 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 UFD1Q92890 307 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 ZNF799Q96GE5 643 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 COX4I2Q96KJ9 171 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 MOB1AQ9H8S9 216 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 SP140LQ9H930 580 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 FAM206AQ9NX38 181 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 PCNX1Q96RV3 2341 aa11.2□□□□□ -0.62
SPG7-209ENST00000564047 TRBV2A0A0J9YWF9 115 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 PLPP2O43688 288 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 BMP4P12644 408 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 CD53P19397 219 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
SPG7-209ENST00000564047 NANOS3P60323 173 aaKnown RBP11.19□□□□□ -0.62
SPG7-209ENST00000564047 MFGE8Q08431 387 aaPredicted RBP11.19□□□□□ -0.62
SPG7-209ENST00000564047 SSX1Q16384 188 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 DCDC5Q6ZRR9 648 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 PRSS45Q7RTY3 260 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 CATSPERDQ86XM0 798 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 IL17RDQ8NFM7 739 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 SMIM19Q96E16 107 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 C4orf45Q96LM5 186 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 C1QTNF6Q9BXI9 259 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 OR51E2Q9H255 320 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 G6PC2Q9NQR9 355 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 NDUFB11Q9NX14 153 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 FRRS1LQ9P0K9 344 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 NDRG3Q9UGV2 375 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 OR52A1Q9UKL2 312 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 PEX16Q9Y5Y5 336 aa11.19□□□□□ -0.62
SPG7-209ENST00000564047 SIRT4Q9Y6E7 314 aaPredicted RBP11.19□□□□□ -0.62
SPG7-209ENST00000564047 A0A075B6Q4 140 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 IGHV1-18A0A0C4DH31 117 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 C5orf49A4QMS7 147 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 THBDP07204 575 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 ANXA2P07355 339 aaKnown RBP11.18□□□□□ -0.62
SPG7-209ENST00000564047 CELA3BP08861 270 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 CECR9P0C854 216 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 CELP19835 753 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 PSMA1P25786 263 aaKnown RBP11.18□□□□□ -0.62
SPG7-209ENST00000564047 SOX6P35712 828 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 ETV6P41212 452 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 SLC6A9P48067 706 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 PPP5CP53041 499 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 HGFACQ04756 655 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 WDR38Q5JTN6 314 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 LIPKQ5VXJ0 399 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 ARL9Q6T311 187 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 SEZ6L2Q6UXD5 910 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 C22orf34Q6ZV56 151 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 PHC2Q8IXK0 858 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 ELMOD2Q8IZ81 293 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 PRSS35Q8N3Z0 413 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 ZFP41Q8N8Y5 198 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 CHCHD6Q9BRQ6 235 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 MED18Q9BUE0 208 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 C1QTNF5Q9BXJ0 243 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 PBOV1Q9GZY1 135 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 CDH20Q9HBT6 801 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 NGBQ9NPG2 151 aa11.18□□□□□ -0.62
SPG7-209ENST00000564047 NUFIP1Q9UHK0 495 aaKnown RBP11.18□□□□□ -0.62
SPG7-209ENST00000564047 STUB1Q9UNE7 303 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 233 ms