RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PYY3Q5JQD4 70 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 KRBOX4Q5JUW0 171 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 ATG4DQ86TL0 474 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 ARRDC1Q8N5I2 433 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF383Q8NA42 475 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 OR13C8Q8NGS7 320 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 GPR148Q8TDV2 347 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF721Q8TF20 911 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 ADIPOR1Q96A54 375 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 TMEM68Q96MH6 324 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 AQP10Q96PS8 301 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 S100A13Q99584 98 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 C2orf88Q9BSF0 95 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 COMMD4Q9H0A8 199 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 PRO3102Q9H379 93 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 FKRPQ9H9S5 495 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 EML5Q05BV3 1969 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 COL5A1P20908 1838 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 A0A1W2PPH5 198 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 C7orf77A4D0Y5 90 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 MEIS3P1A6NDR6 274 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ELOA3DA6NLF2 546 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SLC17A2O00624 439 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SCDO00767 359 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ARPC3O15145 178 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 NUDT21O43809 227 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 DOK2O60496 412 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 DUS4LO95620 317 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 PNMTP11086 282 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 HIST1H1BP16401 226 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 GSK3AP49840 483 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SULT1A2P50226 295 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 EFNA3P52797 238 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 EFNB2P52799 333 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 IL13RA1P78552 427 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ELOA3BQ3SY89 546 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 PLXDC1Q8IUK5 500 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 D2HGDHQ8N465 521 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 NPEPL1Q8NDH3 523 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ELOA3Q8NG57 546 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 OR51D1Q8NGF3 324 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 OR2G2Q8NGZ5 317 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 DNASE2BQ8WZ79 361 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SHDQ96IW2 340 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SSX3Q99909 188 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 GAR1Q9NY12 217 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 MPDZO75970 2070 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 TMEM212A6NML5 194 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF264O43296 627 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 DUX1O43812 170 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 MAS1P04201 325 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 FOLR1P15328 257 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 HOXA6P31267 233 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 CD80P33681 288 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 AQP2P41181 271 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ARRB1P49407 418 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 PKIAP61925 76 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 PPP1R1AQ13522 171 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 PHF19Q5T6S3 580 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 CBLN3Q6UW01 205 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 OR51L1Q8NGJ5 315 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ASB17Q8WXJ9 295 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 FAM3DQ96BQ1 224 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 GPX7Q96SL4 187 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SPSB2Q99619 263 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 NMNAT2Q9BZQ4 307 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 SEMA5BQ9P283 1151 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
RABGGTA-220ENST00000560998 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 M0QYG6 137 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 MED6O75586 246 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 UPK3AO75631 287 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 GLCEO94923 617 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 RD3LP0DJH9 198 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 FBLP22087 321 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 SOX2P48431 317 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 CCR4P51679 360 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 TAS2R31P59538 309 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 PRPS1P60891 318 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 ARHGAP40Q5TG30 622 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 SLC25A45Q8N413 288 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 OR1J1Q8NGS3 322 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 AKR7LQ8NHP1 331 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 LYPD6BQ8NI32 183 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 NUBPLQ8TB37 319 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNRF4Q8WWF5 429 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 LIPHQ8WWY8 451 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF524Q96C55 264 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 RASD2Q96D21 266 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 AKR1E2Q96JD6 320 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 SLC41A2Q96JW4 573 aa12.46□□□□□ -0.41
RABGGTA-220ENST00000560998 LURAP1Q96LR2 239 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms