RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 UBE2E3Q969T4 207 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 RMND5BQ96G75 393 aaPredicted RBP4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 C9orf85Q96MD7 179 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 TRIB3Q96RU7 358 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 LITAFQ99732 161 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 TIMM29Q9BSF4 260 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 ANKRD19PQ9H560 264 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 PARVAQ9NVD7 372 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 UVRAGQ9P2Y5 699 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 NUP50Q9UKX7 468 aa4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 MDC1Q14676 2089 aaKnown RBP4.9□□□□□ -1.63
TGFBR1-208ENST00000550253 ITPR3Q14573 2671 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 F8P00451 2351 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 C2CD3Q4AC94 2353 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 DOCK10Q96BY6 2186 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 IGLV4-3A0A075B6K6 122 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 LOC100653049A0A140TA62 436 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 A0A1W2PPV9 198 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 TRPC5OSA6NMA1 111 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 FOXI3A8MTJ6 420 aaPredicted RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 FCN1O00602 326 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 ALOX12BO75342 701 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 KRT34O76011 436 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 AP2A1O95782 977 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 ATP4BP51164 291 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 RPL26P61254 145 aaKnown RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 CDK16Q00536 496 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 COTL1Q14019 142 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 CRMP1Q14194 572 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 FASTKD3Q14CZ7 662 aaKnown RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 DMRTC1Q5HYR2 192 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 PPP1R2P3Q6NXS1 205 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 DHRS4L2Q6PKH6 230 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 IGFL3Q6UXB1 125 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 ZNF571Q7Z3V5 609 aaPredicted RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 IQCKQ8N0W5 287 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 LIX1Q8N485 282 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 BPIFCQ8NFQ6 507 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 BEST4Q8NFU0 473 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 FAF2Q96CS3 445 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 CXorf40BQ96DE9 158 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 IL4I1Q96RQ9 567 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 FMO2Q99518 471 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 PPDPFQ9H3Y8 114 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 EXOSC3Q9NQT5 275 aaKnown RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 RBM22Q9NW64 420 aaKnown RBP eCLIP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 USH1CQ9Y6N9 552 aa4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 RP1L1Q8IWN7 2480 aaPredicted RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 SNRNP200O75643 2136 aaKnown RBP4.89□□□□□ -1.63
TGFBR1-208ENST00000550253 OR6C74A6NCV1 312 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 TLCD2A6NGC4 264 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 FRG2CA6NGY1 282 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 KCNK1O00180 336 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 ATP5LO75964 103 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 CDK14O94921 469 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 IGLV1-44P01699 117 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 UMPSP11172 480 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 IDSP22304 550 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 VHLP40337 213 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 MAP3K8P41279 467 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 OR1D4P47884 311 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 GSK3BP49841 420 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 KRTAP10-9P60411 292 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 GNG11P61952 73 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 TSPAN5P62079 268 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 PAFAH1B3Q15102 231 aaKnown RBP4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 TEX44Q53QW1 395 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 TTMPQ5BVD1 217 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 PDPK2PQ6A1A2 396 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 ENPP6Q6UWR7 440 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 Q6ZS92 163 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 USP43Q70EL4 1123 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 PEX26Q7Z412 305 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 COMTD1Q86VU5 262 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 SERPINA9Q86WD7 417 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 LRRC34Q8IZ02 419 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 OR2L13Q8N349 312 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 TRAM1L1Q8N609 369 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 PQLC3Q8N755 202 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 ZNF614Q8N883 585 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 ST6GALNAC3Q8NDV1 305 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 OR4C5Q8NGB2 326 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 LHFPL5Q8TAF8 219 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 ADAMTS16Q8TE57 1224 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 DNAJA4Q8WW22 397 aaPredicted RBP4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 HAVCR1Q96D42 359 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 TMEM80Q96HE8 168 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 SLC35A5Q9BS91 424 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 AUNIPQ9H7T9 357 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 GEMIN7Q9H840 131 aaKnown RBP4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 ZNF160Q9HCG1 818 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 HRASLS2Q9NWW9 162 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 IKZF2Q9UKS7 526 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 RNF24Q9Y225 148 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 BTRCQ9Y297 605 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 CPAMD8Q8IZJ3 1885 aa4.88□□□□□ -1.63
TGFBR1-208ENST00000550253 C9JVG2 144 aa4.87□□□□□ -1.63
TGFBR1-208ENST00000550253 PRSS44E7EML9 344 aa4.87□□□□□ -1.63
TGFBR1-208ENST00000550253 UGT1A9O60656 530 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms