RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	PYDC1	Q8WXC3	89 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	AMELY	Q99218	206 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	GAL3ST1	Q99999	423 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	SLC30A2	Q9BRI3	323 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	ZNF665	Q9H7R5	613 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	MARCH7	Q9H992	704 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	TMEM106B	Q9NUM4	274 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	UBAP1	Q9NZ09	502 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	DNAJC27	Q9NZQ0	273 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	LPAR3	Q9UBY5	353 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	PPP1R3C	Q9UQK1	317 aa		11.96	□□□□□ -0.49
CCHCR1-222	ENST00000507459	SVEP1	Q4LDE5	3571 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	GGT3P	A6NGU5	568 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459		F5H5P2	479 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459		M0R129	80 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MLNR	O43193	412 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PRODH	O43272	600 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	H2BFM	P0C1H6	154 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SBK2	P0C263	348 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	EPHA2	P29317	976 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	KPNB1	Q14974	876 aa	Known RBP	11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	RNF133	Q8WVZ7	376 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	C1orf159	Q96HA4	380 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MEGF10	Q96KG7	1140 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	BRD7	Q9NPI1	651 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	NPTN	Q9Y639	398 aa		11.95	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SAC3D1	A6NKF1	404 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CD300LB	A8K4G0	201 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	EBAG9	O00559	213 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PRKY	O43930	277 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LYN	P07948	512 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MSMB	P08118	114 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MRPL3	P09001	348 aa	Known RBP	11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	FAM157C	P0CG43	387 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	HNF1A	P20823	631 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SLC2A5	P22732	501 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SRP9	P49458	86 aa	Known RBP	11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	HCCS	P53701	268 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	RAD23A	P54725	363 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	DVL1P1	P54792	670 aa	Predicted RBP	11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SLC35D3	Q5M8T2	416 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	KDM4D	Q6B0I6	523 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	FAM57B	Q71RH2	274 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	GLCCI1	Q86VQ1	547 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OTOS	Q8NHW6	89 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	RAB39B	Q96DA2	213 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CENPN	Q96H22	339 aa	Predicted RBP	11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	REPIN1	Q9BWE0	567 aa	Known RBP	11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	GABARAPL1	Q9H0R8	117 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TOR3A	Q9H497	397 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	GCM1	Q9NP62	436 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	HIF1AN	Q9NWT6	349 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OAZ3	Q9UMX2	235 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TANC2	Q9HCD6	1990 aa		11.94	□□□□□ -0.5
CCHCR1-222	ENST00000507459	XRCC2	O43543	280 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CYB5R3	P00387	301 aa	Predicted RBP	11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	IFNA2	P01563	188 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	IGHV2-5	P01817	119 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ANPEP	P15144	967 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SRD5A1	P18405	259 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CA6	P23280	308 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OPRL1	P41146	370 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZNF121	P58317	390 aa	Predicted RBP	11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ACTR3	P61158	418 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OR8G1	Q15617	311 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TIGD6	Q17RP2	521 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	GFOD2	Q3B7J2	385 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LRRN1	Q6UXK5	716 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MOGAT3	Q86VF5	341 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TCEANC	Q8N8B7	351 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZNF454	Q8N9F8	522 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OR51F2	Q8NH61	342 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TMEM186	Q96B77	213 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TEAD3	Q99594	435 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CIB1	Q99828	191 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PRRG3	Q9BZD7	231 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LAMP5	Q9UJQ1	280 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PCDHB10	Q9UN67	800 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	KLHDC2	Q9Y2U9	406 aa		11.93	□□□□□ -0.5
CCHCR1-222	ENST00000507459	CCDC182	A6NF36	153 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZAR1L	A6NP61	321 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	TMEM178B	H3BS89	294 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	PLPP2	O43688	288 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	ZNF205	O95201	554 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	IGHV2-70	P01814	119 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	APOC1	P02654	83 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	MMP16	P51512	607 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	BTG1	P62324	171 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	LCN1P1	Q5VSP4	162 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SLX4IP	Q5VYV7	408 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SLC16A9	Q7RTY1	509 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	OR56B2P	Q8NGI1	322 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	DVL3	Q92997	716 aa	Predicted RBP	11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	SGK3	Q96BR1	496 aa		11.92	□□□□□ -0.5
CCHCR1-222	ENST00000507459	REEP6	Q96HR9	211 aa		11.92	□□□□□ -0.5

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