RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	RIDA	P52758	137 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	OR12D2	P58182	307 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ACTA2	P62736	377 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	GRB2	P62993	217 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ACTG2	P63267	376 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	GALK2	Q01415	458 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ROM1	Q03395	351 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ECH1	Q13011	328 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	TBC1D28	Q2M2D7	210 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CDON	Q4KMG0	1287 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	C11orf71	Q6IPW1	123 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	TMPRSS11A	Q6ZMR5	421 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF679	Q8IYX0	411 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF283	Q8N7M2	679 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	FAM169B	Q8N8A8	192 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	SLC30A7	Q8NEW0	376 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	SPTSSA	Q969W0	71 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	C4orf36	Q96KX1	117 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF649	Q9BS31	505 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CDCA4	Q9BXL8	241 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF696	Q9H7X3	374 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ISG20L2	Q9H9L3	353 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CDH20	Q9HBT6	801 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CBLN4	Q9NTU7	201 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	DDX28	Q9NUL7	540 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CRNN	Q9UBG3	495 aa	Predicted RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	MRM2	Q9UI43	246 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	ERGIC3	Q9Y282	383 aa		11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	CAB39	Q9Y376	341 aa	Predicted RBP	11.26	□□□□□ -0.61
NR1H3-223	ENST00000486991	LOC100509620	A0A075B734	347 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	VSTM5	A8MXK1	200 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	MRPS14	O60783	128 aa	Known RBP	11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF254	O75437	659 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	RPP14	O95059	124 aa	Known RBP	11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	IGLV1-44	P01699	117 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	RPSA	P08865	295 aa	Known RBP	11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	TACSTD2	P09758	323 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	CECR9	P0C854	216 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	MAP2K4	P45985	399 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	TPTE	P56180	551 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF684	Q5T5D7	378 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	OR2G6	Q5TZ20	316 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF773	Q6PK81	442 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	DEGS2	Q6QHC5	323 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	MUC15	Q8N387	334 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	SVOP	Q8N4V2	548 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	OR1J2	Q8NGS2	313 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	POM121L2	Q96KW2	1035 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	SIGLEC11	Q96RL6	698 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	KCNJ15	Q99712	375 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	NIPAL2	Q9H841	368 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	ATPIF1	Q9UII2	106 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	GTF2A1L	Q9UNN4	478 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	GRIP1	Q9Y3R0	1128 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	N6AMT1	Q9Y5N5	214 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	ATP23	Q9Y6H3	246 aa		11.25	□□□□□ -0.61
NR1H3-223	ENST00000486991	TMEM129	A0AVI4	362 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991		M0R135	149 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	CD5L	O43866	347 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	SSX4	O60224	188 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	SULT1C4	O75897	302 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	CRYAA	P02489	173 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	MT-ND5	P03915	603 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	APOBEC3A	P31941	199 aa	Predicted RBP	11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	PSMB10	P40306	273 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	SLC6A9	P48067	706 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	CX3CR1	P49238	355 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	DSCR9	P59020	149 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	IRF3	Q14653	427 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	C3orf36	Q3SXR2	165 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	LIPN	Q5VXI9	398 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	RNLS	Q5VYX0	342 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	DNM1P46	Q6ZS02	220 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	RHOU	Q7L0Q8	258 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	KCTD20	Q7Z5Y7	419 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	SYS1	Q8N2H4	156 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	NANOGP1	Q8N7R0	232 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	TSPAN14	Q8NG11	270 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	OR52N1	Q8NH53	320 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	GATAD2B	Q8WXI9	593 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF799	Q96GE5	643 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	MND1	Q9BWT6	205 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	BRD7	Q9NPI1	651 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	ACOXL	Q9NUZ1	547 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	FBXO9	Q9UK97	447 aa	Predicted RBP	11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	PMF1-BGLAP	U3KQ54	211 aa		11.24	□□□□□ -0.61
NR1H3-223	ENST00000486991	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	7e-10	■■■□□ 16.3
NR1H3-223	ENST00000486991	IGHV4-30-2	A0A087WSY4	118 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991		A0A087WXM4	84 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	MAGEA13P	A6NCF6	341 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	ATP6V1G2-DDX39B	F2Z307	99 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	ABHD16A	O95870	558 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	APOC1	P02654	83 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	ANXA2	P07355	339 aa	Known RBP	11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	ACSM4	P0C7M7	580 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	SLC2A1	P11166	492 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms