RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 N6AMT1Q9Y5N5 214 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 TRAV20A0A0B4J274 112 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 PHF1O43189 567 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 HMGN1P05114 100 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 PCMT1P22061 227 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 SRP14P37108 136 aaKnown RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 SRP9P49458 86 aaKnown RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 MMP16P51512 607 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 ZMYND11Q15326 602 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 KLHL12Q53G59 568 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 FAHD2BQ6P2I3 314 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 MRPL21Q7Z2W9 205 aaKnown RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 LRRC28Q86X40 367 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 BBS1Q8NFJ9 593 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 SPRYD4Q8WW59 207 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 FAHD2AQ96GK7 314 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 REPIN1Q9BWE0 567 aaKnown RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 SLC25A19Q9HC21 320 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 G6PC2Q9NQR9 355 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 PAPOLBQ9NRJ5 636 aaKnown RBP10.86□□□□□ -0.67
HDAC1-209ENST00000484305 KIF17Q9P2E2 1029 aa10.86□□□□□ -0.67
HDAC1-209ENST00000484305 CD300LBA8K4G0 201 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 SELENOFO60613 162 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 ZNF205O95201 554 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 CYB5R3P00387 301 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-209ENST00000484305 AVPP01185 164 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 SLC2A5P22732 501 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 CA6P23280 308 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 THBS2P35442 1172 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 PMELP40967 661 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 SLC15A1P46059 708 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 CX3CR1P49238 355 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 CRISP1P54107 249 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 BTG1P62324 171 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 GRB2P62993 217 aaKnown RBP10.85□□□□□ -0.67
HDAC1-209ENST00000484305 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
HDAC1-209ENST00000484305 MAB21L1Q13394 359 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 ATP6AP1Q15904 470 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 C1orf146Q5VVC0 180 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 C1orf229Q6ZS94 237 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-209ENST00000484305 SHFQ7M4L6 423 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 MOGAT3Q86VF5 341 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 OR5K1Q8NHB7 308 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 TVP23BQ9NYZ1 205 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 PCDHB10Q9UN67 800 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 AP4S1Q9Y587 144 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 DOCK11Q5JSL3 2073 aa10.85□□□□□ -0.67
HDAC1-209ENST00000484305 DNHD1Q96M86 4753 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 GGT3PA6NGU5 568 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PRODHO43272 600 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 TBX1O43435 398 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 MITFO75030 526 aaPredicted RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PNPP00491 289 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 ANXA2P07355 339 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 ZFP36P26651 326 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 HSD11B1P28845 292 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 MDH2P40926 338 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 OPRL1P41146 370 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 NAA10P41227 235 aaPredicted RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 GATA4P43694 442 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 SEC61A1P61619 476 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 LCN2P80188 198 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PTGES3Q15185 160 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 OR8G1Q15617 311 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 SNAPC1Q16533 368 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 TMEM155Q4W5P6 130 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PRSS45Q7RTY3 260 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 AMIGO2Q86SJ2 522 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PARP8Q8N3A8 854 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 KLHL36Q8N4N3 616 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 OTOSQ8NHW6 89 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 DUS3LQ96G46 650 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PLEKHA8Q96JA3 519 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 TEX12Q9BXU0 123 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 PATZ1Q9HBE1 687 aaKnown RBP10.84□□□□□ -0.67
HDAC1-209ENST00000484305 DNAJC27Q9NZQ0 273 aa10.84□□□□□ -0.67
HDAC1-209ENST00000484305 A0A0G2JMP0 313 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 A0A0X1KG70 313 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 G3V2T6 193 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 IFNL4K9M1U5 179 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 XRCC2O43543 280 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 LYNP07948 512 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 FASP25445 335 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 CD200P41217 278 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 HCCSP53701 268 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 RAD23AP54725 363 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 ZNF121P58317 390 aaPredicted RBP10.83□□□□□ -0.68
HDAC1-209ENST00000484305 RPS7P62081 194 aaKnown RBP10.83□□□□□ -0.68
HDAC1-209ENST00000484305 APOFQ13790 326 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 MPPED2Q15777 294 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 ZNF181Q2M3W8 571 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 SLC35D3Q5M8T2 416 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 FAM201AQ5SY85 155 aa10.83□□□□□ -0.68
HDAC1-209ENST00000484305 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms