RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MSI2Q96DH6 328 aaKnown RBP12.67□□□□□ -0.38
ATG4B-213ENST00000460211 TEAD3Q99594 435 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 CIB1Q99828 191 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 YIPF3Q9GZM5 350 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 SLC22A4Q9H015 551 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 LAMP5Q9UJQ1 280 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 GGT3PA6NGU5 568 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 IFNL4K9M1U5 179 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 TBX1O43435 398 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 SELENOFO60613 162 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 LMX1BO60663 402 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 ANXA2P07355 339 aaKnown RBP12.66□□□□□ -0.38
ATG4B-213ENST00000460211 ANPEPP15144 967 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 ZNF16P17020 682 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-213ENST00000460211 SLC2A5P22732 501 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 NAA10P41227 235 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-213ENST00000460211 CX3CR1P49238 355 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 MVKQ03426 396 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 SNAI3Q3KNW1 292 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 KCTD18Q6PI47 426 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-213ENST00000460211 SLC16A9Q7RTY1 509 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 TCEANCQ8N8B7 351 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 LINC01356Q8N9X3 169 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 OR52H1Q8NGJ2 320 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 CLDND2Q8NHS1 167 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 OR2V2Q96R30 315 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 PKP2Q99959 881 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 SLC30A2Q9BRI3 323 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 RIBC2Q9H4K1 309 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 NARFLQ9H6Q4 476 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 NIPAL2Q9H841 368 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 TMEM160Q9NX00 188 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 TREM2Q9NZC2 230 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 PPP1R3CQ9UQK1 317 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 TMEM14AQ9Y6G1 99 aa12.66□□□□□ -0.38
ATG4B-213ENST00000460211 SLC22A31A6NKX4 558 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 B4DSR2 109 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 PRKYO43930 277 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 SLC2A1P11166 492 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 CFL1P23528 166 aaKnown RBP12.65□□□□□ -0.38
ATG4B-213ENST00000460211 DDOSTP39656 456 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 OPRL1P41146 370 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 ZNF92Q03936 586 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 AVPI1Q5T686 147 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 NXNL2Q5VZ03 156 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 C12orf73Q69YU5 71 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 MEPCEQ7L2J0 689 aaKnown RBP12.65□□□□□ -0.38
ATG4B-213ENST00000460211 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 RAB39BQ96DA2 213 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 GABARAPL3Q9BY60 117 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 TMEM106BQ9NUM4 274 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-213ENST00000460211 CDC42EP3Q9UKI2 254 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 WIPI2Q9Y4P8 454 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 CACNG2Q9Y698 323 aa12.65□□□□□ -0.38
ATG4B-213ENST00000460211 ISPDA4D126 451 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 H3BNX3 289 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 PCMT1P22061 227 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 EPHA2P29317 976 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 IL2RGP31785 369 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 CDH15P55291 814 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 OR8G1Q15617 311 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 TIGD6Q17RP2 521 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 GLYATL3Q5SZD4 288 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 FAM57BQ71RH2 274 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 KRT77Q7Z794 578 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 GID4Q8IVV7 300 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 OR2AE1Q8NHA4 323 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 ASB17Q8WXJ9 295 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 PGAM5Q96HS1 289 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 MEGF10Q96KG7 1140 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 IL4I1Q96RQ9 567 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
ATG4B-213ENST00000460211 GAL3ST1Q99999 423 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 BEX2Q9BXY8 128 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 SHARPINQ9H0F6 387 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 DNAJC27Q9NZQ0 273 aa12.64□□□□□ -0.39
ATG4B-213ENST00000460211 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-213ENST00000460211 CCDC182A6NF36 153 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 LRRC30A6NM36 301 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 GMDSO60547 372 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 FAM157CP0CG43 387 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 ALOX5APP20292 161 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 HNF1AP20823 631 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF121P58317 390 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-213ENST00000460211 CDC42P60953 191 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 EFNB1P98172 346 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
ATG4B-213ENST00000460211 MZT1Q08AG7 82 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 SNCBQ16143 134 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 KRTAP24-1Q3LI83 254 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 AADACL4Q5VUY2 407 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 DEGS2Q6QHC5 323 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms