RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SEBOXQ9HB31 216 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 INTS9Q9NV88 658 aaKnown RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 PTTG2Q9NZH5 202 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 CTSZQ9UBR2 303 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 MRTO4Q9UKD2 239 aaKnown RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 CBY1Q9Y3M2 126 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF780BQ9Y6R6 833 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 A0A087WV62 115 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 LOC102723971A0A1B0GUV8 181 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 A0A1B0GVI7 797 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 A6NDX4 124 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 FAM90A10PA6NDY2 464 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 MIF4GDA9UHW6 222 aaKnown RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 H0YIV9 168 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GTPBP1O00178 669 aaKnown RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CLIC1O00299 241 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 UPK1AO00322 258 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 RRHO14718 337 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 RIPK2O43353 540 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GLRA3O75311 464 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GMNNO75496 209 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 FCN3O75636 299 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 IFNB1P01574 187 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 SMR3BP02814 79 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CD55P08174 381 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 RHCEP18577 417 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CPT2P23786 658 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 IVDP26440 423 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 ACAA2P42765 397 aaKnown RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 PCP4P48539 62 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 MAPK12P53778 367 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CDH13P55290 713 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 UCP2P55851 309 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 P2RX3P56373 397 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 SCRN3Q0VDG4 424 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 MERTKQ12866 999 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CAMK2DQ13557 499 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 MFSD13AQ14CX5 517 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 KCTD19Q17RG1 926 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CEACAM16Q2WEN9 425 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CCDC58Q4VC31 144 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CCNYL2Q5T2Q4 361 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 FAM45BPQ6NSW5 357 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 TMEM107Q6UX40 140 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 ACP7Q6ZNF0 438 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 IDO2Q6ZQW0 420 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 FRA10AC1Q70Z53 315 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 PEX26Q7Z412 305 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 COMMD6Q7Z4G1 85 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 ADAMTSL2Q86TH1 951 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GPAT4Q86UL3 456 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 RNF130Q86XS8 419 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 ARMC8Q8IUR7 673 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 SGPP2Q8IWX5 399 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 LINC00518Q8N0U6 118 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 LYPD1Q8N2G4 141 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 OR2L13Q8N349 312 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 TCAIMQ8N3R3 496 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 Q8N7P7 452 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 L3MBTL4Q8NA19 623 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 SLC26A10Q8NG04 563 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GRK7Q8WTQ7 553 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 PHLDA1Q8WV24 401 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CIDECQ96AQ7 238 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 OPALINQ96PE5 141 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 CDRT15Q96T59 188 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 TMED9Q9BVK6 235 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 C20orf96Q9NUD7 363 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 GIN1Q9NXP7 522 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF224Q9NZL3 707 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 ZIM2Q9NZV7 527 aa3.79□□□□□ -1.8
SDCBP-205ENST00000447267 C19orf53Q9UNZ5 99 aaPredicted RBP3.79□□□□□ -1.8
SDCBP-205ENST00000447267 A0A0J9YWU9 116 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 A0A1W2PPM1 405 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 FUOMA2VDF0 154 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 RPL36A-HNRNPH2H7BZ11 118 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 RGS10O43665 173 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 SSX5O60225 188 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 ATP5HO75947 161 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 KCNK2O95069 426 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 NKX2-2O95096 273 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 AKR7A3O95154 331 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 RAB36O95755 333 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 FAM107AO95990 144 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 ALDOBP05062 364 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 HSMCR30P0CW71 290 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 ARSBP15848 533 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 STMN1P16949 149 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 CALB2P22676 271 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 RCVRNP35243 200 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 BCAP31P51572 246 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 CCR4P51679 360 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 NKX2-5P52952 324 aaPredicted RBP3.78□□□□□ -1.8
SDCBP-205ENST00000447267 MYL5Q02045 173 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 PMS2P3Q13401 168 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 SMU1Q2TAY7 513 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 LIN52Q52LA3 116 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 INTS11Q5TA45 600 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms