RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ST6GALNAC2Q9UJ37 374 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 CACNA1CQ13936 2221 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 CD63P08962 238 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 F2RL1P55085 397 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 ERVK-16P61578 105 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 PLA2G2FQ9BZM2 168 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 NOSIPQ9Y314 301 aaKnown RBP15.67■□□□□ 0.1
PTPRU-202ENST00000373779 UMAD1C9J7I0 102 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 TRIM77I1YAP6 450 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 ZNF354AO60765 605 aaPredicted RBP15.67■□□□□ 0.1
PTPRU-202ENST00000373779 NKX2-1P43699 371 aaPredicted RBP15.67■□□□□ 0.1
PTPRU-202ENST00000373779 HBG1P69891 147 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 HBG2P69892 147 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 FOXF1Q12946 379 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 FAM209AQ5JX71 171 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 CD200R1LQ6Q8B3 271 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 ZNF813Q6ZN06 617 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 AGBL5Q8NDL9 886 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 OR1S2Q8NGQ3 325 aa15.67■□□□□ 0.1
PTPRU-202ENST00000373779 M0R135 149 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 DCTN6O00399 190 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 NDUFA6P56556 154 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 HSD17B13Q7Z5P4 300 aaPredicted RBP15.66■□□□□ 0.1
PTPRU-202ENST00000373779 ZNF799Q96GE5 643 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 LRRC61Q9BV99 259 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 FRRS1LQ9P0K9 344 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 PCDHB10Q9UN67 800 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 A0A0G2JMZ2 1700 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 LRRC37A2A6NM11 1700 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 ANKUB1A6NFN9 424 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 RNF212BA8MTL3 300 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 E5RGE8 158 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 PRSS44E7EML9 344 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 VAMP5O95183 116 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 NSG2Q9Y328 171 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 PSG6Q00889 435 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 DEFA6Q01524 100 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 STRAPQ9Y3F4 350 aaKnown RBP15.66■□□□□ 0.1
PTPRU-202ENST00000373779 LILRA5A6NI73 299 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 NXPH3O95157 252 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 CD96P40200 585 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 RNF4P78317 190 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 RPP30P78346 268 aaKnown RBP15.66■□□□□ 0.1
PTPRU-202ENST00000373779 RHOFQ9HBH0 211 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 NIT2Q9NQR4 276 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 PRELID3BQ9Y3B1 194 aa15.66■□□□□ 0.1
PTPRU-202ENST00000373779 GLI4P10075 376 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 SUMO3P55854 103 aaPredicted RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 FUT5Q11128 374 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 SHEQ5VZ18 495 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 IL34Q6ZMJ4 242 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 ZAR1Q86SH2 424 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 CDC20BQ86Y33 519 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 PLEKHA3Q9HB20 300 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 GHRLQ9UBU3 117 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 PCDHGA9Q9Y5G4 932 aaKnown RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 A0A0U1RQK1 487 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 CENPVL1A0A0U1RR11 272 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 IFNA10P01566 189 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 GUSBP08236 651 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 CBLN3Q6UW01 205 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 TRILQ7L0X0 811 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 TRAPPC2LQ9UL33 140 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 CEBPZOSA8MTT3 80 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 ZNF705GA8MUZ8 300 aaPredicted RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 HSD17B6O14756 317 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 ICAM2P13598 275 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 GABRA1P14867 456 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 ECH1Q13011 328 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 RBMS3Q6XE24 437 aaKnown RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 RABEPKQ7Z6M1 372 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 C12orf57Q99622 126 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 SDHCQ99643 169 aaPredicted RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 KCNK15Q9H427 330 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 PLXNA1Q9UIW2 1896 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 C9orf170A2RU37 121 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 AADACP22760 399 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 KIAA0141Q14154 515 aaPredicted RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 B3GNTL1Q67FW5 361 aaPredicted RBP15.65■□□□□ 0.1
PTPRU-202ENST00000373779 OR1N1Q8NGS0 311 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 CMBLQ96DG6 245 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 SDSLQ96GA7 329 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 UQCC2Q9BRT2 126 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 GHITMQ9H3K2 345 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 MOSPD3O75425 235 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 OR5H8P0DN80 308 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 ABCD3P28288 659 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 FMODQ06828 376 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 RAB31Q13636 194 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 SFT2D1Q8WV19 159 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 PHYHIPLQ96FC7 376 aa15.65■□□□□ 0.1
PTPRU-202ENST00000373779 ERVH48-1M5A8F1 160 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 LINC01565O15544 149 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 DFFBO76075 338 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 IL2RGP31785 369 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 OPRM1P35372 400 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 NOXO1Q8NFA2 376 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 FN3KRPQ9HA64 309 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 NTMQ9P121 344 aa15.64■□□□□ 0.09
PTPRU-202ENST00000373779 OR14J1Q9UGF5 321 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms