RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ITFG2Q969R8 447 aa15.73■□□□□ 0.11
CHTOP-202ENST00000368687 SLC30A2Q9BRI3 323 aa15.73■□□□□ 0.11
CHTOP-202ENST00000368687 TMEM100Q9NV29 134 aa15.73■□□□□ 0.11
CHTOP-202ENST00000368687 IMPAD1Q9NX62 359 aa15.73■□□□□ 0.11
CHTOP-202ENST00000368687 WARS2Q9UGM6 360 aaKnown RBP15.73■□□□□ 0.11
CHTOP-202ENST00000368687 ZNF391Q9UJN7 358 aa15.73■□□□□ 0.11
CHTOP-202ENST00000368687 IGHV4-61A0A0C4DH41 118 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 PPIHO43447 177 aaKnown RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 ZNF254O75437 659 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 ANXA2P07355 339 aaKnown RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 ALOX5APP20292 161 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 COL8A2P25067 703 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 DDOSTP39656 456 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 NAA10P41227 235 aaPredicted RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 SRP9P49458 86 aaKnown RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 GABPB1Q06547 395 aaPredicted RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 ZSCAN26Q16670 478 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 AADACL4Q5VUY2 407 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 CBR4Q8N4T8 237 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 GTF3AQ92664 365 aaKnown RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 RAB1CQ92928 201 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 YIPF5Q969M3 257 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 EME1Q96AY2 570 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 HRASLS5Q96KN8 279 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 REPIN1Q9BWE0 567 aaKnown RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 MROQ9BYG7 248 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 OR10A2Q9H208 303 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 C8orf4Q9NR00 106 aa15.72■□□□□ 0.11
CHTOP-202ENST00000368687 MRPL15Q9P015 296 aaKnown RBP15.72■□□□□ 0.11
CHTOP-202ENST00000368687 A0A1B0GWJ7 208 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 CCDC182A6NF36 153 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 ACOD1A6NK06 481 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 LYNX1G3V0Z9 82 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 CDC14BO60729 498 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 LYNX1P0DP58 116 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 DCTDP32321 178 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 KRTAP1-1Q07627 177 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 MZT1Q08AG7 82 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 TIGD6Q17RP2 521 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 SNAI3Q3KNW1 292 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 Q6ZR03 302 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 SPATC1Q76KD6 591 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 KRT77Q7Z794 578 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 NAA40Q86UY6 237 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 KLBQ86Z14 1044 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 OR5AS1Q8N127 324 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 FTMTQ8N4E7 242 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 CELF2-AS1Q8N7Q2 184 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 SPSB4Q96A44 273 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 IL4I1Q96RQ9 567 aa15.71■□□□□ 0.11
CHTOP-202ENST00000368687 GGT3PA6NGU5 568 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 SNTNA6NMZ2 147 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 LILRA1O75019 489 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 HTR1FP30939 366 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 PSMA6P60900 246 aaKnown RBP15.7■□□□□ 0.1
CHTOP-202ENST00000368687 ROM1Q03395 351 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 GLYATL3Q5SZD4 288 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 C6orf52Q5T4I8 152 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 ZBTB49Q6ZSB9 765 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 BHLHE23Q8NDY6 225 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 CCL17Q92583 94 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 ERGIC1Q969X5 290 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 RDH12Q96NR8 316 aa15.7■□□□□ 0.1
CHTOP-202ENST00000368687 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHTOP-202ENST00000368687 CD300LBA8K4G0 201 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 A8MV72 311 aaPredicted RBP15.69■□□□□ 0.1
CHTOP-202ENST00000368687 TBX1O43435 398 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 GMDSO60547 372 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 IGHV4-31P0DP07 118 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 ZNF121P58317 390 aaPredicted RBP15.69■□□□□ 0.1
CHTOP-202ENST00000368687 ZNF92Q03936 586 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 KRTAP21-3Q3LHN1 58 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 SLC25A30Q5SVS4 291 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 MEDAGQ5VYS4 303 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 ZNF679Q8IYX0 411 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 SPERTQ8NA61 448 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 FAM81AQ8TBF8 368 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 OR2V2Q96R30 315 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 AMELYQ99218 206 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 CLN6Q9NWW5 311 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 TMEM160Q9NX00 188 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 PPP1R3CQ9UQK1 317 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 SONP18583 2426 aaKnown RBP15.69■□□□□ 0.1
CHTOP-202ENST00000368687 DYSFO75923 2080 aa15.69■□□□□ 0.1
CHTOP-202ENST00000368687 LRRC30A6NM36 301 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 MPZL2O60487 215 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 BAG2O95816 211 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 MRPL3P09001 348 aaKnown RBP15.68■□□□□ 0.1
CHTOP-202ENST00000368687 SLC2A1P11166 492 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 PCMT1P22061 227 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 POLR2IP36954 125 aaKnown RBP15.68■□□□□ 0.1
CHTOP-202ENST00000368687 EGR3Q06889 387 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 ZNF829Q3KNS6 432 aaPredicted RBP15.68■□□□□ 0.1
CHTOP-202ENST00000368687 FAM166AQ6J272 317 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 FAM57BQ71RH2 274 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 PRSS45Q7RTY3 260 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 CSNK2A3Q8NEV1 391 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 OR2AE1Q8NHA4 323 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 RAB39BQ96DA2 213 aa15.68■□□□□ 0.1
CHTOP-202ENST00000368687 REEP6Q96HR9 211 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms