RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 VSTM4Q8IW00 320 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 TMEM123Q8N131 208 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZFP62Q8NB50 900 aaPredicted RBP4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 APCDD1LQ8NCL9 501 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 KLHL30-AS1Q8NEE0 82 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR51G2Q8NGK0 314 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 C7orf34Q96L11 122 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CITED1Q99966 193 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 AICDAQ9GZX7 198 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 DEFB127Q9H1M4 99 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 VCX2Q9H322 139 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CAB39LQ9H9S4 337 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 KCNJ16Q9NPI9 418 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 SPATA7Q9P0W8 599 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 PIPOXQ9P0Z9 390 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 SPRR3Q9UBC9 169 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPH3ALQ9UNE2 315 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 PCM1Q15154 2024 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 MXRA5Q9NR99 2828 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 TLN2Q9Y4G6 2542 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CCDC88CQ9P219 2028 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ANKRD12Q6UB98 2062 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 A8MUA0 341 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 GFYI3L273 518 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 BCL2L11O43521 198 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 CHST10O43529 356 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 GPX5O75715 221 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 GLSO94925 669 aaPredicted RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 LRATO95237 230 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 LY6G6DO95868 133 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 UQCRHP07919 91 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF44P15621 663 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 GDF1P27539 372 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 LAP3P28838 519 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 IMPA1P29218 277 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPA3P35244 121 aaPredicted RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 CYB561P49447 251 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 RWDD2BP57060 319 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR4D2P58180 307 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 CD47Q08722 323 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ARHGAP19Q14CB8 494 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PDK3Q15120 406 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PTRHD1Q6GMV3 140 aaKnown RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 TTC23LQ6PF05 361 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 SYT10Q6XYQ8 523 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 MBOAT1Q6ZNC8 495 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 C16orf62Q7Z3J2 963 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 MOB3BQ86TA1 216 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZCCHC7Q8N3Z6 543 aaKnown RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR10A7Q8NGE5 316 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR4D5Q8NGN0 318 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 SKA2Q8WVK7 121 aaPredicted RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PIGCQ92535 297 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PEX13Q92968 403 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PPP1R2P1Q96PQ5 205 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ALS2CR12Q96Q35 445 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 SPNS1Q9H2V7 528 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 GLIPR2Q9H4G4 154 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PLEKHF2Q9H8W4 249 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZDHHC11Q9H8X9 412 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC17A5Q9NRA2 495 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 SIGLEC8Q9NYZ4 499 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 C6orf203Q9P0P8 240 aaPredicted RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 RIMS3Q9UJD0 308 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PTBP2Q9UKA9 531 aaKnown RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 PACSIN2Q9UNF0 486 aaPredicted RBP4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 NAALAD2Q9Y3Q0 740 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC22A7Q9Y694 548 aa4.19□□□□□ -1.74
RNU4-39P-201ENST00000362455 ANK2Q01484 3957 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 FAM166BA8MTA8 275 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CDC40O60508 579 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 B4GALT2O60909 372 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 VAPBO95292 243 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 THY1P04216 161 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 SMIM10L1P0DMW3 83 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CALB2P22676 271 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 FASP25445 335 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CD80P33681 288 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPL22P35268 128 aaKnown RBP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 MDH2P40926 338 aaKnown RBP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 P2RY1P47900 373 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 TTPAP49638 278 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 STARP49675 285 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 LMO4P61968 165 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 CUL1Q13616 776 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 TMED2Q15363 201 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 DEFB134Q4QY38 66 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 LINC00523Q86TU6 105 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 BIVMQ86UB2 503 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 LRRC6Q86X45 466 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF679Q8IYX0 411 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 DHRSXQ8N5I4 330 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF321PQ8N8H1 164 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 PRELID2Q8N945 189 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF740Q8NDX6 193 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR1F12Q8NHA8 337 aa4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 RERGQ96A58 199 aaPredicted RBP4.18□□□□□ -1.74
RNU4-39P-201ENST00000362455 SMIM10Q96HG1 83 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms