RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SPIN2AQ99865 258 aa11.44□□□□□ -0.58
DNMT3A-202ENST00000321117 SPIN2BQ9BPZ2 258 aa11.44□□□□□ -0.58
DNMT3A-202ENST00000321117 PLA2G2FQ9BZM2 168 aa11.44□□□□□ -0.58
DNMT3A-202ENST00000321117 GPR84Q9NQS5 396 aa11.44□□□□□ -0.58
DNMT3A-202ENST00000321117 FLVCR1Q9Y5Y0 555 aa11.44□□□□□ -0.58
DNMT3A-202ENST00000321117 MPZL1O95297 269 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 HOXC4P09017 264 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SLC25A42Q86VD7 318 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 GPR119Q8TDV5 335 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 GPX7Q96SL4 187 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 ASH2LQ9UBL3 628 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 PCOLCE2Q9UKZ9 415 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SCN8AQ9UQD0 1980 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 RNASEK-C17orf49H0YIS7 233 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 OIP5O43482 229 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 LCATP04180 440 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 S100A8P05109 93 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 DLX2Q07687 328 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 TOMM34Q15785 309 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 NANPQ8TBE9 248 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNRF4Q8WWF5 429 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 TRPM7Q96QT4 1865 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF354AO60765 605 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 IFNA5P01569 189 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 ITGB2P05107 769 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 GPR3P46089 330 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 CAPZBP47756 277 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 GPR85P60893 370 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SPACA1Q9HBV2 294 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 TRBV11-1A0A0K0K1C0 115 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 STMND1H3BQB6 276 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SLC25A4P12235 298 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF44P15621 663 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 CD38P28907 300 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 PNLIPRP2P54317 469 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 GFERP55789 205 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SKP2Q13309 424 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 C2orf68Q2NKX9 166 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 TMEM176BQ3YBM2 270 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 EXOSC6Q5RKV6 272 aaKnown RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SLC36A1Q7Z2H8 476 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 SCGB1C1Q8TD33 95 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 PIGTQ969N2 578 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 AMELYQ99218 206 aa11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 NAA11Q9BSU3 229 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF107Q9UII5 783 aaPredicted RBP11.43□□□□□ -0.58
DNMT3A-202ENST00000321117 TRBV5-7A0A0A0MS05 114 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 NME2P1O60361 137 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 AKR1C3P42330 323 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 MTCP1P56278 107 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 FAHD2BQ6P2I3 314 aaPredicted RBP11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 NAA40Q86UY6 237 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF695Q8IW36 515 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 WDSUB1Q8N9V3 476 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 MITD1Q8WV92 249 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 FAHD2AQ96GK7 314 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 ARL5BQ96KC2 179 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 MOB1AQ9H8S9 216 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 UQCC1Q9NVA1 299 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 CD207Q9UJ71 328 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 CABIN1Q9Y6J0 2220 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 IGHV3-20A0A0C4DH32 117 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 SFTA3P0C7M3 94 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 CCNOP22674 350 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 APOBEC1P41238 236 aaKnown RBP11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 DOK3Q7L591 496 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 FAM174AQ8TBP5 190 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 ST7LQ8TDW4 575 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 C11orf40Q8WZ69 217 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 RPP25Q9BUL9 199 aaKnown RBP11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 PRRG4Q9BZD6 226 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 NMNAT2Q9BZQ4 307 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 ADAP1O75689 374 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF728P0DKX0 622 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 LAP3P28838 519 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 DHODHQ02127 395 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 DMRTC1Q5HYR2 192 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 ARHGEF39Q8N4T4 335 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 CTHRC1Q96CG8 243 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 CASP8AP2Q9UKL3 1982 aa11.42□□□□□ -0.58
DNMT3A-202ENST00000321117 COL9A1P20849 921 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ECI1P42126 302 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 RAB5CP51148 216 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 FUT7Q11130 342 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 OGFOD3Q6PK18 319 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 OR52H1Q8NGJ2 320 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 METTL9Q9H1A3 318 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 FN3KRPQ9HA64 309 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 RAB18Q9NP72 206 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 SRPK3Q9UPE1 567 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 VSIG4Q9Y279 399 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 PHF19Q5T6S3 580 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 CATSPERDQ86XM0 798 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms