RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 COMMD1Q8N668 190 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 OR1P1Q8NH06 330 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 LYPD6BQ8NI32 183 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 C1orf216Q8TAB5 229 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SMPDL3BQ92485 455 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 GHSRQ92847 366 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SMIM10Q96HG1 83 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF681Q96N22 645 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SMIM14Q96QK8 99 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 TXN2Q99757 166 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 EBPLQ9BY08 206 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SLC17A9Q9BYT1 436 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SMG9Q9H0W8 520 aaKnown RBP5.96□□□□□ -1.45
ZNF540-201ENST00000316433 ADGRL4Q9HBW9 690 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 PDE7BQ9NP56 450 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 MKKSQ9NPJ1 570 aaPredicted RBP5.96□□□□□ -1.45
ZNF540-201ENST00000316433 TRIM36Q9NQ86 728 aa5.96□□□□□ -1.45
ZNF540-201ENST00000316433 MRPS18BQ9Y676 258 aaKnown RBP5.96□□□□□ -1.45
ZNF540-201ENST00000316433 SCN5AQ14524 2016 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 CDHR4A6H8M9 788 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 SCDO00767 359 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 RAMP1O60894 148 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 NME6O75414 186 aaPredicted RBP5.96□□□□□ -1.46
ZNF540-201ENST00000316433 TSPAN15O95858 294 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 CHATP28329 748 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 CD70P32970 193 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 GABRA4P48169 554 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 UBE2G2P60604 165 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 ARF6P62330 175 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 AGBL4Q5VU57 503 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 METRNLQ641Q3 311 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 KLHL24Q6TFL4 600 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF836Q6ZNA1 936 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 SYT9Q86SS6 491 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 BIVMQ86UB2 503 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 C17orf64Q86WR6 236 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 CATSPERDQ86XM0 798 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 BBS1Q8NFJ9 593 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 OR4K14Q8NGD5 310 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 OR5W2Q8NH69 310 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 STT3BQ8TCJ2 826 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 RAB39BQ96DA2 213 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 PGLYRP3Q96LB9 341 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 SAMD8Q96LT4 415 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 SMAD5Q99717 465 aaKnown RBP5.96□□□□□ -1.46
ZNF540-201ENST00000316433 EIF5A2Q9GZV4 153 aaKnown RBP5.96□□□□□ -1.46
ZNF540-201ENST00000316433 SLC35B3Q9H1N7 401 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 OR2S2Q9NQN1 319 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 VAX2Q9UIW0 290 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 CDV3Q9UKY7 258 aaKnown RBP5.96□□□□□ -1.46
ZNF540-201ENST00000316433 SLC5A6Q9Y289 635 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 NOP16Q9Y3C1 178 aaKnown RBP5.96□□□□□ -1.46
ZNF540-201ENST00000316433 ATG2AQ2TAZ0 1938 aa5.96□□□□□ -1.46
ZNF540-201ENST00000316433 MDC1Q14676 2089 aaKnown RBP5.96□□□□□ -1.46
ZNF540-201ENST00000316433 TVP23AA6NH52 213 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 C17orf105B2RV13 164 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 NDUFS4O43181 175 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 TNFSF14O43557 240 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 PRNPP04156 253 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 HNRNPA1P09651 372 aaKnown RBP eCLIP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 LIPCP11150 499 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 CSRP1P21291 193 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 ACAA2P42765 397 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 PRKAG1P54619 331 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 TAS2R50P59544 299 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 SCGB2A2Q13296 93 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 ACSM3Q53FZ2 586 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 FHL5Q5TD97 284 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 AADACL3Q5VUY0 350 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 MEPCEQ7L2J0 689 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 DEFB132Q7Z7B7 95 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 SELENOHQ8IZQ5 122 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 C17orf47Q8NEP4 570 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 TSLPQ969D9 159 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 S100A16Q96FQ6 103 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 PRRX2Q99811 253 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 SCRT1Q9BWW7 348 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 TPSD1Q9BZJ3 242 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 UPB1Q9UBR1 384 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 ST6GALNAC2Q9UJ37 374 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 YBX2Q9Y2T7 364 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 PCYT1BQ9Y5K3 369 aaPredicted RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 CSAG2Q9Y5P2 127 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 TRAV39A0A0B4J263 110 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 ANKUB1A6NFN9 424 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 J3KRW8 73 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 LEFTY2O00292 366 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 SLC25A17O43808 307 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 NUDT21O43809 227 aaKnown RBP5.95□□□□□ -1.46
ZNF540-201ENST00000316433 GPANK1O95872 356 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 SCGB1D1O95968 90 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 ITGB2P05107 769 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 EPHX1P07099 455 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 CSF1P09603 554 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 RAB40ALP0C0E4 278 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 ARR3P36575 388 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 UCP3P55916 312 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 DCAF7P61962 342 aa5.95□□□□□ -1.46
ZNF540-201ENST00000316433 H3F3AP84243 136 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms