RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 NMES1Q9C002 83 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 A0A0B4J203 849 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 TXNL1O43396 289 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 CSN1S1P47710 185 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 EIF3IQ13347 325 aaKnown RBP15.61■□□□□ 0.09
SHANK1-201ENST00000293441 KTI12Q96EK9 354 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-201ENST00000293441 GON7Q9BXV9 100 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 A0A087WUJ7 227 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 ZNF71Q9NQZ8 489 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-201ENST00000293441 ARPC3O15145 178 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-201ENST00000293441 SCGB1D1O95968 90 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 CELA2BP08218 269 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-201ENST00000293441 ANKRD37Q7Z713 158 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 ST8SIA4Q92187 359 aa15.61■□□□□ 0.09
SHANK1-201ENST00000293441 CISD3P0C7P0 127 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 POU3F3P20264 500 aaPredicted RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 HES3Q5TGS1 186 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 TMEM215Q68D42 235 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 LILRA6Q6PI73 481 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 FOXB1Q99853 325 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 PTDSS2Q9BVG9 487 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 A0A1B0GTL3 188 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 SOX18P35713 384 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 DBPQ10586 325 aaPredicted RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 FAM109BQ6ICB4 259 aaPredicted RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 HLA-HP01893 362 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 ERHP84090 104 aaKnown RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 DGCR2P98153 550 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 PTOV1Q86YD1 416 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 CA5BP1Q8WTZ4 195 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 PATZ1Q9HBE1 687 aaKnown RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 B9D1Q9UPM9 204 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 ST3GAL6Q9Y274 331 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 CSAG2Q9Y5P2 127 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 TERTO14746 1132 aaKnown RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 PKMYT1Q99640 499 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 SLC25A19Q9HC21 320 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 NPAP1Q9NZP6 1156 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 M0R296 226 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 OR5G3P0C626 314 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 IAPPP10997 89 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 S100A11P31949 105 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 UBE2G1P62253 170 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 LIN7CQ9NUP9 197 aaKnown RBP15.6■□□□□ 0.09
SHANK1-201ENST00000293441 NDUFB11Q9NX14 153 aa15.6■□□□□ 0.09
SHANK1-201ENST00000293441 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SULT1C4O75897 302 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 RAB1AP62820 205 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 GSG1Q2KHT4 349 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 DBX2Q6ZNG2 339 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.59■□□□□ 0.09
SHANK1-201ENST00000293441 NUDCD2Q8WVJ2 157 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SMIM19Q96E16 107 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 UGT2A1Q9Y4X1 527 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 COL18A1P39060 1754 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 IGHV1OR21-1A0A087WYE8 117 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 FCGR2CP31995 323 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 BTN1A1Q13410 526 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SMIM21Q3B7S5 101 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 LYSMD2Q8IV50 215 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 TCRBV5S2A0A599 114 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 OR13C7P0DN81 318 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 FAHP16930 419 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 JUNBP17275 347 aaPredicted RBP15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SOHLH1Q5JUK2 328 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 YIPF5Q969M3 257 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 MRGPRX3Q96LB0 322 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 ACKR3P25106 362 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SSPNQ14714 243 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 HMGN3Q15651 99 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 FAAP20Q6NZ36 180 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 CREB3L2Q70SY1 520 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SFTPA1Q8IWL2 248 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 DTWD2Q8NBA8 298 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 SCPEP1Q9HB40 452 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 PRDM7Q9NQW5 492 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 A4GNTQ9UNA3 340 aa15.59■□□□□ 0.09
SHANK1-201ENST00000293441 ST8SIA3O43173 380 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 NDUFA6P56556 154 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 MOB3BQ86TA1 216 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 OSR2Q8N2R0 312 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 BPIFCQ8NFQ6 507 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 SLC35B4Q969S0 331 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 COMMD5Q9GZQ3 224 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 RAB5CP51148 216 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 TLE1Q04724 770 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 SNTB1Q13884 538 aaKnown RBP15.58■□□□□ 0.09
SHANK1-201ENST00000293441 PRSS36Q5K4E3 855 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 STAC2Q6ZMT1 411 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 PRSS41Q7RTY9 318 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 TMEM179BQ7Z7N9 219 aa15.58■□□□□ 0.09
SHANK1-201ENST00000293441 ZNF707Q96C28 371 aaPredicted RBP15.58■□□□□ 0.09
SHANK1-201ENST00000293441 LRP5O75197 1615 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 OIP5O43482 229 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 PI3P19957 117 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 SDHBP21912 280 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 TAGLN2P37802 199 aaKnown RBP15.58■□□□□ 0.08
SHANK1-201ENST00000293441 P2RX3P56373 397 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 TMUB2Q71RG4 321 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms