RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SLC5A6Q9Y289 635 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 FLVCR1Q9Y5Y0 555 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 NCOA6Q14686 2063 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 CXCL13O43927 109 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 F10P00742 488 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 HPXP02790 462 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 CXCL3P19876 107 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF93P35789 620 aaPredicted RBP11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 CD96P40200 585 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 TAS2R19P59542 299 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 MRPS34P82930 218 aaKnown RBP11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 OR10K2Q6IF99 312 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 DHRS13Q6UX07 377 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 GLDNQ6ZMI3 551 aaPredicted RBP11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 FAM46BQ96A09 425 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 SEH1LQ96EE3 360 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 MED30Q96HR3 178 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 PTTG3PQ9NZH4 202 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF319Q9P2F9 582 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 PCDHGA1Q9Y5H4 931 aa11.4□□□□□ -0.59
SPTLC1-201ENST00000262554 MEIKINA0A087WXM9 373 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 OR5H15A6NDH6 313 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 LINC01387J3KSC0 135 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 TERTO14746 1132 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 SCGNO76038 276 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 APOC1P02654 83 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 ABOP16442 354 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 SLC6A9P48067 706 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 STARP49675 285 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 MECP2P51608 486 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 HIST1H3AP68431 136 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 GFOD2Q3B7J2 385 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 PDSS1Q5T2R2 415 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 HIST2H3PS2Q5TEC6 136 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 HES3Q5TGS1 186 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 AWAT2Q6E213 333 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 SPINK14Q6IE38 97 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 STEAP1BQ6NZ63 245 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM53Q6P2H8 277 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 HIST2H3AQ71DI3 136 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 CDH26Q8IXH8 852 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 TMEM229BQ8NBD8 167 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 CLEC1AQ8NC01 280 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 ACBD4Q8NC06 268 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 OR10D3Q8NH80 312 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 NKD1Q969G9 470 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 FAM173AQ9BQD7 235 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 GON7Q9BXV9 100 aa11.39□□□□□ -0.59
SPTLC1-201ENST00000262554 PINLYPA6NC86 204 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF716A6NP11 495 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 F5H5K5 113 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 TNFRSF10AO00220 468 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 CD3DP04234 171 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 IL5P05113 134 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 RAD52P43351 418 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 FOXO1Q12778 655 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 Q5BKY6 102 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 DCAF10Q5QP82 559 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 FAM27BQ5VT28 67 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 AAED1Q7RTV5 226 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ANGPTL5Q86XS5 388 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 GABRG1Q8N1C3 465 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 OR4D10Q8NGI6 311 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 OR8S1Q8NH09 359 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ROBO4Q8WZ75 1007 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ADGRG7Q96K78 797 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 GINS4Q9BRT9 223 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 SOX7Q9BT81 388 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 B4GALT7Q9UBV7 327 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 FBLN5Q9UBX5 448 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 CFAP54Q96N23 3096 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 A0A0U1RQV5 110 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 SNRPGP15A8MWD9 76 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 CREBL2O60519 120 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 TNFSF15O95150 251 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 CYB5AP00167 134 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 HCKP08631 526 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 VSIG8P0DPA2 414 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ANXA7P20073 488 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ITGA3P26006 1051 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 GFRA1P56159 465 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 QRFPP83859 136 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 UNC119Q13432 240 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 MOGAT2Q3SYC2 334 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ABLIM2Q6H8Q1 611 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 Q6ZTK2 550 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 OR5AS1Q8N127 324 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 GPR137CQ8N3F9 429 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 PAQR4Q8N4S7 273 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 OR51S1Q8NGJ8 323 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 SPTSSAQ969W0 71 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 CPNE4Q96A23 557 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 IP6K3Q96PC2 410 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 SEC22CQ9BRL7 303 aa11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 ZNF436Q9C0F3 470 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-201ENST00000262554 PLEK2Q9NYT0 353 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms