RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PHLDA2Q53GA4 152 aa14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 GFI1BQ5VTD9 330 aa14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 CLEC18BQ6UXF7 455 aa14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 ABHD12BQ7Z5M8 362 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 TBL1XR1Q9BZK7 514 aa14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 FAM212BQ9NTI7 297 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-201ENST00000261897 H3BML4 177 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 IGKV1D-16P01601 117 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 CEBPBP17676 345 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 GABRR1P24046 479 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 HSD11B1P28845 292 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 DVL1P1P54792 670 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 YAF2Q8IY57 180 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 ZFP62Q8NB50 900 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 NECAP1Q8NC96 275 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 G6PC3Q9BUM1 346 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 CNTD2Q9H8S5 307 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 TRPM7Q96QT4 1865 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 DENND4AQ7Z401 1863 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 OR8U8P0C7N1 319 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 PRF1P14222 555 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 GPX4P36969 197 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 ACAA2P42765 397 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 SNU13P55769 128 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 TMEM33P57088 247 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 SLC17A1Q14916 467 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 RPUSD3Q6P087 351 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 TMEM123Q8N131 208 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 OR51T1Q8NGJ9 327 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 FAM3CQ92520 227 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 ABHD6Q9BV23 337 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 SVILO95425 2214 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 GATCO43716 136 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 RNGTTO60942 597 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 SLC34A2O95436 690 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 PRSS12P56730 875 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 SLC35D3Q5M8T2 416 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 HIST2H3PS2Q5TEC6 136 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 MED25Q71SY5 747 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 ZFYVE21Q9BQ24 234 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 WBP1LQ9NX94 342 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 LUZP4Q9P127 313 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 HIF3AQ9Y2N7 669 aa14.28□□□□□ -0.12
PRPF40B-201ENST00000261897 ZNF850A8MQ14 1090 aa14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 FKTNO75072 461 aa14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 OLFM2O95897 454 aa14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 KLK2P20151 261 aa14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 TSPO2Q5TGU0 170 aa14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 GLIPR1L1Q6UWM5 242 aa14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 SLC25A43Q8WUT9 341 aaPredicted RBP14.27□□□□□ -0.12
PRPF40B-201ENST00000261897 SMCO3A2RU48 225 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 EFSO43281 561 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 KLF8O95600 359 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 DUS4LO95620 317 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 LAG3P18627 525 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 CHATP28329 748 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 ACKR1Q16570 336 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 MICBQ29980 383 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 FBXO42Q6P3S6 717 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 CCDC54Q8NEL0 328 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 PBDC1Q9BVG4 233 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 CHST11Q9NPF2 352 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 CARHSP1Q9Y2V2 147 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 CLDN4O14493 209 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 FBP1P09467 338 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 SLC25A4P12235 298 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 ALDH3B1P43353 468 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 SP3Q02447 781 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 MESTQ5EB52 335 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 LINC01590Q5TEZ4 76 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 SMOC1Q9H4F8 434 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 DOK5Q9P104 306 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 LRP12Q9Y561 859 aa14.27□□□□□ -0.13
PRPF40B-201ENST00000261897 MMP7P09237 267 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 IL12BP29460 328 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 PEBP1P30086 187 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 CTNNB1P35222 781 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 PYY3Q5JQD4 70 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 ZNF813Q6ZN06 617 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 OR1J1Q8NGS3 322 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 TERB2Q8NHR7 220 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 PPP4R1LQ9P1A2 415 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 SERTAD3Q9UJW9 196 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 OR52A1Q9UKL2 312 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 ADAM10O14672 748 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 SPINT1O43278 529 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 ZNF93P35789 620 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 PPP1CAP62136 330 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 RPS4XP62701 263 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 SPIN3Q5JUX0 258 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 TANGO2Q6ICL3 276 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 FIP1L1Q6UN15 594 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 PLXDC2Q6UX71 529 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 SNX22Q96L94 193 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 TSPAN32Q96QS1 320 aa14.26□□□□□ -0.13
PRPF40B-201ENST00000261897 PRTFDC1Q9NRG1 225 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms