RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 CD79AP11912 226 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 CARD18P57730 90 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 SKP2Q13309 424 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 PXDC1Q5TGL8 231 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 RPS19BP1Q86WX3 136 aaKnown RBP7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 MUC20Q8N307 709 aaPredicted RBP7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 GALNT16Q8N428 558 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 SEMA6DQ8NFY4 1073 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 CADM4Q8NFZ8 388 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 SPACA5Q96QH8 159 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 UQCC2Q9BRT2 126 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 DNTTIP1Q9H147 329 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 NECAP2Q9NVZ3 263 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 ZNF646O15015 1829 aaPredicted RBP7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 VWA8A3KMH1 1905 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 PIAS2O75928 621 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 ATG12O94817 140 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 GPANK1O95872 356 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 ADRB1P08588 477 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 SMIM10L1P0DMW3 83 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 CTLA4P16410 223 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 PRKACAP17612 351 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 APLNRP35414 380 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 SNRPNP63162 240 aaKnown RBP7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 DBPQ10586 325 aaPredicted RBP7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 HMGN3Q15651 99 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 PCK2Q16822 640 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 ZNF529Q6P280 563 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 TMEM71Q6P5X7 295 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 FAM122BQ7Z309 247 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 ARRDC1Q8N5I2 433 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 ZDHHC22Q8N966 263 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 OR1S1Q8NH92 325 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 GPR119Q8TDV5 335 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 EMG1Q92979 244 aaKnown RBP7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 SMIM10Q96HG1 83 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 CTSFQ9UBX1 484 aa7.73□□□□□ -1.17
HNRNPU-219ENST00000639628 G3V3Y1 287 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 TRAPPC2LH3BP13 241 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 TAAR5O14804 337 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 BCL2L11O43521 198 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SGCEO43556 437 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 ACSM4P0C7M7 580 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 RAB6AP20340 208 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SELENOPP49908 381 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 UBE2NP61088 152 aaKnown RBP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SMAD4Q13485 552 aaKnown RBP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 HLXQ14774 488 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 PNLIPRP3Q17RR3 467 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 RELL2Q8NC24 303 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 OR1L3Q8NH93 324 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 MARCH1Q8TCQ1 289 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 PGLYRP3Q96LB9 341 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 PAPOLGQ9BWT3 736 aaKnown RBP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 GHITMQ9H3K2 345 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SIT1Q9Y3P8 196 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 TMEM229AB2RXF0 380 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 PLPP3O14495 311 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SEMA7AO75326 666 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 HPXP02790 462 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 CNR1P21554 472 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SLC37A1P57057 533 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 C11orf87Q6NUJ2 197 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 BEND4Q6ZU67 534 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 TMEM200AQ86VY9 491 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 NOXO1Q8NFA2 376 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 HLA-CQ95604 372 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 EDARQ9UNE0 448 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 CASP8AP2Q9UKL3 1982 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 IGHV1OR21-1A0A087WYE8 117 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 MCRIP1C9JLW8 97 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 M0R135 149 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SCO1O75880 301 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 OR2J2O76002 312 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 ZP3P21754 424 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 NME2P22392 152 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 FCARP24071 287 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 WDR5BQ86VZ2 330 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 BAP18Q8IXM2 172 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 OR6K3Q8NGY3 331 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 TERB2Q8NHR7 220 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 C8orf44Q96CB5 159 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 ZNF799Q96GE5 643 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 SCARF2Q96GP6 870 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 NELFAQ9H3P2 528 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 DTX4Q9Y2E6 619 aa7.72□□□□□ -1.17
HNRNPU-219ENST00000639628 A6NLC8 198 aa7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 KLF4O43474 513 aa7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 FOXS1O43638 330 aa7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 TBX6O95947 436 aaPredicted RBP7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 IGKV1D-16P01601 117 aa7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 SDHBP21912 280 aa7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 ZNF121P58317 390 aaPredicted RBP7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 RPL23AP62750 156 aaKnown RBP7.71□□□□□ -1.17
HNRNPU-219ENST00000639628 FMODQ06828 376 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms