RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SIGLEC11Q96RL6 698 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SCPEP1Q9HB40 452 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 ZNF286AQ9HBT8 521 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 CRLF2Q9HC73 371 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 CLEC2DQ9UHP7 191 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 FOXJ3Q9UPW0 622 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 PIGLQ9Y2B2 252 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 DTX4Q9Y2E6 619 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 DOCK8Q8NF50 2099 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 NUP210Q8TEM1 1887 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 PROB1E7EW31 1015 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 BHLHE40O14503 412 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 TXNDC12O95881 172 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SEMG1P04279 462 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 ZNF44P15621 663 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 LIPAP38571 399 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 RFC3P40938 356 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 TOR2AQ5JU69 321 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 C16orf47Q6ZP98 133 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 DGAT2L6Q6ZPD8 337 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 BCDIN3DQ7Z5W3 292 aaKnown RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 ZAR1Q86SH2 424 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 MRPL41Q8IXM3 137 aaKnown RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 INO80EQ8NBZ0 244 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 THAP6Q8TBB0 222 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 RNF128Q8TEB7 428 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 HAS2Q92819 552 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 MCHR2Q969V1 340 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 TTTY12Q9BZ98 90 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 PBOV1Q9GZY1 135 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SLC5A6Q9Y289 635 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 MRPS18CQ9Y3D5 142 aaKnown RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 CHD5Q8TDI0 1954 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 PLXNA4Q9HCM2 1894 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 ZNF816-ZNF321PA0A0X1KG74 233 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 NKX6-3A6NJ46 265 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 CREBL2O60519 120 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 TSC22D2O75157 780 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 WBP4O75554 376 aaKnown RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 UPK1BO75841 260 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 RAB3DO95716 219 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 IGKV1D-16P01601 117 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 CSN2P05814 226 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 HEXAP06865 529 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 CST2P09228 141 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 H2AFB2P0C5Z0 115 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 TMIGD3P0DMS9 266 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 TUBG1P23258 451 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 FGF9P31371 208 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 CYCSP99999 105 aaKnown RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 SRSF2Q01130 221 aaKnown RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 FGL1Q08830 312 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SOWAHCQ53LP3 525 aaPredicted RBP4.93□□□□□ -1.62
CHD2-227ENST00000637572 CLVS2Q5SYC1 327 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 LPCAT3Q6P1A2 487 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 OR1M1Q8NGA1 313 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 ZFAND1Q8TCF1 268 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SLC25A46Q96AG3 418 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 OPALINQ96PE5 141 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SPIN2AQ99865 258 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SPIN2BQ9BPZ2 258 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 SLC5A7Q9GZV3 580 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 BCO1Q9HAY6 547 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 TUBG2Q9NRH3 451 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 DECR2Q9NUI1 292 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 NUBP2Q9Y5Y2 271 aa4.93□□□□□ -1.62
CHD2-227ENST00000637572 CROCCQ5TZA2 2017 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 DIDO1Q9BTC0 2240 aaKnown RBP4.92□□□□□ -1.62
CHD2-227ENST00000637572 MKI67P46013 3256 aaKnown RBP4.92□□□□□ -1.62
CHD2-227ENST00000637572 AQP7O14520 342 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 LYRM1O43325 122 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 SMIM18P0DKX4 95 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 CD1EP15812 388 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 SHC1P29353 583 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 GABRA4P48169 554 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 IDH3GP51553 393 aaPredicted RBP4.92□□□□□ -1.62
CHD2-227ENST00000637572 PCGF3Q3KNV8 242 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 SAMD5Q5TGI4 173 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 FAM219BQ5XKK7 198 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 FDX2Q6P4F2 183 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 TMED4Q7Z7H5 227 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 APCDD1LQ8NCL9 501 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 OR4D11Q8NGI4 311 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 NPRL2Q8WTW4 380 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 FAM3DQ96BQ1 224 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 RAB3CQ96E17 227 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 TIMD4Q96H15 378 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 IMMP1LQ96LU5 166 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 THAP7Q9BT49 309 aaPredicted RBP4.92□□□□□ -1.62
CHD2-227ENST00000637572 SLC6A15Q9H2J7 730 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 FAIMQ9NVQ4 179 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 MRPS18AQ9NVS2 196 aaKnown RBP4.92□□□□□ -1.62
CHD2-227ENST00000637572 ZNF69Q9UC07 566 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 LRP5LA4QPB2 252 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 ANKRD61A6NGH8 418 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 AIPO00170 330 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 CDC42EP2O14613 210 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 TK1P04183 234 aa4.92□□□□□ -1.62
CHD2-227ENST00000637572 AMY2AP04746 511 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms