RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 THRSPQ92748 146 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 C10orf35Q96D05 121 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 DHRS9Q9BPW9 319 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 C1QTNF6Q9BXI9 259 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 TRIM36Q9NQ86 728 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 FAIMQ9NVQ4 179 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 FAM206AQ9NX38 181 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 GRIP1Q9Y3R0 1128 aa10.61□□□□□ -0.71
TGFB1-204ENST00000600196 ICE1Q9Y2F5 2266 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 HEATR1Q9H583 2144 aaKnown RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 RTTNQ86VV8 2226 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 A0A087WXM4 84 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 SHISA9B4DS77 424 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 LOC110117498-PIK3R3F6TDL0 507 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 OGG1O15527 345 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 SMPD2O60906 423 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 LCATP04180 440 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 CELA3BP08861 270 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 CALCRP30988 508 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 ETV1P50549 477 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 HGFACQ04756 655 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 DBPQ10586 325 aaPredicted RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 SPHARQ15513 63 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 EFNB3Q15768 340 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF672Q499Z4 452 aaPredicted RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 FAM209AQ5JX71 171 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 ZBTB37Q5TC79 503 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 SSX6Q7RTT6 188 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 ELMOD2Q8IZ81 293 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF611Q8N823 705 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 RPS4Y2Q8TD47 263 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 RORBQ92753 470 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 HAVCR1Q96D42 359 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 PIK3IP1Q96FE7 263 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 CYSLTR2Q9NS75 346 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 CA10Q9NS85 328 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 PAK1IP1Q9NWT1 392 aaPredicted RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 GNG8Q9UK08 70 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 NOP16Q9Y3C1 178 aaKnown RBP10.6□□□□□ -0.71
TGFB1-204ENST00000600196 CMAHPQ9Y471 501 aa10.6□□□□□ -0.71
TGFB1-204ENST00000600196 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 IGLV3-9A0A075B6K5 115 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 TRIM64CA6NLI5 447 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 J3QLW9 94 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 SIAH2O43255 324 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 GPRIN2O60269 458 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 MTRF1O75570 445 aaKnown RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 APOL3O95236 402 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 IGLV3-1P01715 115 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 IGHV3-13P01766 116 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 HTR1AP08908 422 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 UBCP0CG48 685 aaKnown RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 BMP4P12644 408 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF19P17023 458 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 CCNOP22674 350 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 WNT5AP41221 380 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 SLC6A9P48067 706 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 PRKXP51817 358 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 OR12D2P58182 307 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 ZNF121P58317 390 aaPredicted RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 PPP1CBP62140 327 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 ALKBH1Q13686 389 aaKnown RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 RGS7BPQ6MZT1 257 aaPredicted RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 C20orf204Q6ZNR8 217 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 CATSPERDQ86XM0 798 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 PIAS4Q8N2W9 510 aaPredicted RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 PLPP7Q8NBV4 271 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 OR2G2Q8NGZ5 317 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 PELI1Q96FA3 418 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 MARS2Q96GW9 593 aaKnown RBP10.59□□□□□ -0.71
TGFB1-204ENST00000600196 C4orf36Q96KX1 117 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 TBX5Q99593 518 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 SLC22A4Q9H015 551 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 VCX3AQ9NNX9 186 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 ABCB9Q9NP78 766 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 G6PC2Q9NQR9 355 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 OR52A1Q9UKL2 312 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 CADP27708 2225 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 PRR14LQ5THK1 2151 aa10.59□□□□□ -0.71
TGFB1-204ENST00000600196 ABCA4P78363 2273 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 MAGEA13PA6NCF6 341 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 PRR32B1ATL7 298 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 B9A039 149 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 ATP6V1G2-DDX39BF2Z307 99 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 HS3ST1O14792 307 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 PLPP2O43688 288 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 ATE1O95260 518 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 ANXA2P07355 339 aaKnown RBP10.58□□□□□ -0.72
TGFB1-204ENST00000600196 DBHP09172 617 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 KITLGP21583 273 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 CCL1P22362 96 aa10.58□□□□□ -0.72
TGFB1-204ENST00000600196 PSMA1P25786 263 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms